Gm56752 Gene Detail

Summary

• Symbol
  Gm56752
• Name
  predicted gene, 56752

• Feature Type
  lncRNA gene
• IDs
  MGI:7337417
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr14:122342339-122344346 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337417	lncRNA gene	Chr14:122342339-122344346 (+)
129S1/SvImJ	ENSMUSG00200025565	lncRNA gene	Chr14:111255076-111257031 (+)
A/J	ENSMUSG00195031878	lncRNA gene	Chr14:110993778-110995733 (+)
AKR/J	ENSMUSG00220008106	lncRNA gene	Chr14:110809261-110811216 (+)
BALB/cJ	ENSMUSG00180028195	lncRNA gene	Chr14:110485589-110487544 (+)
C3H/HeJ	ENSMUSG00175002001	lncRNA gene	Chr14:112397364-112399319 (+)
C57BL/6NJ	ENSMUSG00215024165	lncRNA gene	Chr14:110610281-110612236 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007255	lncRNA gene	Chr14:112014078-112016007 (+)
CBA/J	ENSMUSG00210027412	lncRNA gene	Chr14:111370694-111372649 (+)
DBA/2J	ENSMUSG00185014338	lncRNA gene	Chr14:116511333-116513288 (+)
FVB/NJ	ENSMUSG00205007810	lncRNA gene	Chr14:110086406-110088361 (+)
JF1/MsJ	ENSUMUG00000032631	lncRNA gene	Chr14:127518793-127520715 (+)
LP/J	ENSMUSG00230013028	lncRNA gene	Chr14:128482734-128484689 (+)
NOD/ShiLtJ	ENSMUSG00190025449	lncRNA gene	Chr14:111211395-111213350 (+)
NZO/HlLtJ	ENSMUSG00225029315	lncRNA gene	Chr14:118566840-118568795 (+)
PWK/PhJ	ENSLUMG00010030660	lncRNA gene	Chr14:110455825-110457747 (+)
SPRET/EiJ	ENSMSPG00010014650	lncRNA gene	Chr14:114739308-114741251 (+)
WSB/EiJ	ENSIUOG00005031510	lncRNA gene	Chr14:110397385-110399340 (+)

Homology

• Gene Tree
  Gm56752
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120004 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120004	Ensembl Gene Model | MGI Sequence Detail	2008	C57BL/6J
transcript	ENSMUST00000240994	Ensembl | MGI Sequence Detail	2008	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56752:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr127313	Chr14:122342413-122342442 (+)	89 bp
Tssr127314	Chr14:122342535-122342555 (+)	206 bp