Gm56741 Gene Detail

Summary

• Symbol
  Gm56741
• Name
  predicted gene, 56741

• Feature Type
  lncRNA gene
• IDs
  MGI:7337395
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:77724580-77725819 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337395	lncRNA gene	Chr15:77724580-77725819 (-)
129S1/SvImJ	ENSMUSG00200054022	lncRNA gene	Chr15:74839883-74840159 (-)
A/J	ENSMUSG00195052093	lncRNA gene	Chr15:74782117-74782393 (-)
AKR/J	ENSMUSG00220053282	lncRNA gene	Chr15:74825678-74825954 (-)
BALB/cJ	ENSMUSG00180053604	lncRNA gene	Chr15:74659188-74659464 (-)
C3H/HeJ	ENSMUSG00175053555	lncRNA gene	Chr15:74970580-74970856 (-)
C57BL/6NJ	ENSMUSG00215052749	lncRNA gene	Chr15:74731798-74732070 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048138	lncRNA gene	Chr15:74282495-74282755 (-)
CBA/J	ENSMUSG00210049793	lncRNA gene	Chr15:74745783-74746059 (-)
DBA/2J	ENSMUSG00185051311	lncRNA gene	Chr15:74755200-74755476 (-)
FVB/NJ	ENSMUSG00205052612	lncRNA gene	Chr15:74475312-74475588 (-)
JF1/MsJ	ENSUMUG00000055924	lncRNA gene	Chr15:74325945-74326225 (-)
LP/J	ENSMUSG00230052815	lncRNA gene	Chr15:78088405-78088681 (-)
NOD/ShiLtJ	ENSMUSG00190054025	lncRNA gene	Chr15:74768713-74768981 (-)
NZO/HlLtJ	ENSMUSG00225054222	lncRNA gene	Chr15:78419647-78419915 (-)
PWK/PhJ	ENSLUMG00010053160	lncRNA gene	Chr15:74556803-74557079 (-)
SPRET/EiJ	ENSMSPG00010051486	lncRNA gene	Chr15:76223496-76223754 (-)
WSB/EiJ	ENSIUOG00005049743	lncRNA gene	Chr15:74812678-74812946 (-)

Homology

• Gene Tree
  Gm56741
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120785 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120785	Ensembl Gene Model | MGI Sequence Detail	1240	C57BL/6J
transcript	ENSMUST00000245790	Ensembl | MGI Sequence Detail	947	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56741:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr4645	Chr15:77724814-77724846 (-)	989 bp