Gm56732 Gene Detail

Summary

• Symbol
  Gm56732
• Name
  predicted gene, 56732

• Feature Type
  lncRNA gene
• IDs
  MGI:7337377
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:41210818-41263266 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1919 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337377	lncRNA gene	Chr15:41210818-41263266 (+)
129S1/SvImJ	ENSMUSG00200028199	lncRNA gene	Chr15:38159656-38209948 (+)
A/J	ENSMUSG00195037613	lncRNA gene	Chr15:38150187-38202818 (+)
AKR/J	ENSMUSG00220031570	lncRNA gene	Chr15:38048674-38102897 (+)
BALB/cJ	ENSMUSG00180034075	lncRNA gene	Chr15:38128381-38180993 (+)
C3H/HeJ	ENSMUSG00175029671	lncRNA gene	Chr15:38303116-38357413 (+)
C57BL/6NJ	ENSMUSG00215027330	lncRNA gene	Chr15:38122892-38175509 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011027	lncRNA gene	Chr15:38127137-38180273 (+)
CBA/J	ENSMUSG00210018407	lncRNA gene	Chr15:38243749-38296357 (+)
DBA/2J	ENSMUSG00185035849	lncRNA gene	Chr15:38224603-38277230 (+)
FVB/NJ	ENSMUSG00205032759	lncRNA gene	Chr15:38096005-38161043 (+)
JF1/MsJ	ENSUMUG00000038330	lncRNA gene	Chr15:38058672-38109020 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190034749	lncRNA gene	Chr15:38176620-38230872 (+)
NZO/HlLtJ	ENSMUSG00225037982	lncRNA gene	Chr15:41902834-41955435 (+)
PWK/PhJ	ENSLUMG00010033432	lncRNA gene	Chr15:38236932-38287249 (+)
SPRET/EiJ	ENSMSPG00010014085	lncRNA gene	Chr15:39043724-39098179 (+)
WSB/EiJ	ENSIUOG00005034747	lncRNA gene	Chr15:38199546-38264597 (+)

Homology

• Gene Tree
  Gm56732
  

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000120264 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120264	Ensembl Gene Model | MGI Sequence Detail	52449	C57BL/6J
transcript	ENSMUST00000291442	Ensembl | MGI Sequence Detail	1400	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56732:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr131186	Chr15:41210824-41210859 (+)	24 bp