Gm56726 Gene Detail

Summary

• Symbol
  Gm56726
• Name
  predicted gene, 56726

• Feature Type
  lncRNA gene
• IDs
  MGI:7337365
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr15:83407381-83409769 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  216 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337365	lncRNA gene	Chr15:83407381-83409769 (+)
129S1/SvImJ	ENSMUSG00200053846	lncRNA gene	Chr15:80533077-80534745 (+)
A/J	ENSMUSG00195051655	lncRNA gene	Chr15:80459401-80461069 (+)
AKR/J	ENSMUSG00220053297	lncRNA gene	Chr15:80503080-80504748 (+)
BALB/cJ	ENSMUSG00180053892	lncRNA gene	Chr15:80336309-80337977 (+)
C3H/HeJ	ENSMUSG00175053426	lncRNA gene	Chr15:80647242-80648910 (+)
C57BL/6NJ	ENSMUSG00215053523	lncRNA gene	Chr15:80425236-80426904 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005049196	lncRNA gene	Chr15:79926619-79928289 (+)
CBA/J	ENSMUSG00210049605	lncRNA gene	Chr15:80422237-80423905 (+)
DBA/2J	ENSMUSG00185051965	lncRNA gene	Chr15:80455712-80457383 (+)
FVB/NJ	ENSMUSG00205052759	lncRNA gene	Chr15:80204202-80205870 (+)
JF1/MsJ	ENSUMUG00000056686	lncRNA gene	Chr15:79985368-79987038 (+)
LP/J	ENSMUSG00230046597	lncRNA gene	Chr15:83773414-83775082 (+)
NOD/ShiLtJ	ENSMUSG00190053871	lncRNA gene	Chr15:80439361-80441029 (+)
NZO/HlLtJ	ENSMUSG00225050597	lncRNA gene	Chr15:84107097-84108765 (+)
PWK/PhJ	ENSLUMG00010053107	lncRNA gene	Chr15:80188987-80190658 (+)
SPRET/EiJ	ENSMSPG00010050921	lncRNA gene	Chr15:81848834-81850504 (+)
WSB/EiJ	ENSIUOG00005050459	lncRNA gene	Chr15:80522591-80524259 (+)

Homology

• Gene Tree
  Gm56726
  

Sequences &
Gene Models

• All Sequences
  33

• Ensembl
  ENSMUSG00000120415 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120415	Ensembl Gene Model | MGI Sequence Detail	2389	C57BL/6J
transcript	ENSMUST00000347930	Ensembl | MGI Sequence Detail	1654	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56726:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr132425	Chr15:83407604-83407608 (+)	225 bp
Tssr132426	Chr15:83408177-83408188 (+)	802 bp