Gm56717 Gene Detail

Summary

• Symbol
  Gm56717
• Name
  predicted gene, 56717

• Feature Type
  lncRNA gene
• IDs
  MGI:7337348
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:59489618-59499580 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  418 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337348	lncRNA gene	Chr15:59489618-59499580 (+)
129S1/SvImJ	ENSMUSG00200029180	lncRNA gene	Chr15:56475668-56478453 (+)
A/J	ENSMUSG00195006236	lncRNA gene	Chr15:56542372-56545154 (+)
AKR/J	ENSMUSG00220021970	lncRNA gene	Chr15:56516760-56519542 (+)
BALB/cJ	ENSMUSG00180009297	lncRNA gene	Chr15:56474176-56476978 (+)
C3H/HeJ	ENSMUSG00175005293	lncRNA gene	Chr15:56728228-56731080 (+)
C57BL/6NJ	ENSMUSG00215013673	lncRNA gene	Chr15:56459398-56462183 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007031	lncRNA gene	Chr15:56348971-56351915 (+)
CBA/J	ENSMUSG00210007151	lncRNA gene	Chr15:56556350-56559202 (+)
DBA/2J	ENSMUSG00185028132	lncRNA gene	Chr15:56517022-56519807 (+)
FVB/NJ	ENSMUSG00205006833	lncRNA gene	Chr15:56297855-56300642 (+)
JF1/MsJ	ENSUMUG00000041382	lncRNA gene	Chr15:56318642-56321581 (+)
LP/J	ENSMUSG00230008328	lncRNA gene	Chr15:59819262-59822047 (+)
NOD/ShiLtJ	ENSMUSG00190017822	lncRNA gene	Chr15:56539159-56541961 (+)
NZO/HlLtJ	ENSMUSG00225028668	lncRNA gene	Chr15:60152211-60154993 (+)
PWK/PhJ	ENSLUMG00010028791	lncRNA gene	Chr15:56601974-56604863 (+)
SPRET/EiJ	ENSMSPG00010025538	lncRNA gene	Chr15:57786547-57789399 (+)
WSB/EiJ	ENSIUOG00005006358	lncRNA gene	Chr15:56565453-56568255 (+)

Homology

• Gene Tree
  Gm56717
  

Sequences &
Gene Models

• All Sequences
  45

• Ensembl
  ENSMUSG00000120397 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120397	Ensembl Gene Model | MGI Sequence Detail	9963	C57BL/6J
transcript	ENSMUST00000246732	Ensembl | MGI Sequence Detail	2732	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;