Gm56715 Gene Detail

Summary

• Symbol
  Gm56715
• Name
  predicted gene, 56715

• Feature Type
  lncRNA gene
• IDs
  MGI:7337344
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:67048835-67050089 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337344	lncRNA gene	Chr15:67048835-67050089 (+)
129S1/SvImJ	ENSMUSG00200020062	lncRNA gene	Chr15:64148909-64149613 (+)
A/J	ENSMUSG00195028576	lncRNA gene	Chr15:64204619-64205323 (+)
AKR/J	ENSMUSG00220022226	lncRNA gene	Chr15:64054289-64054993 (+)
BALB/cJ	ENSMUSG00180023849	lncRNA gene	Chr15:64016950-64017654 (+)
C3H/HeJ	ENSMUSG00175005295	lncRNA gene	Chr15:64363326-64364030 (+)
C57BL/6NJ	ENSMUSG00215006071	lncRNA gene	Chr15:64043092-64043796 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020414	lncRNA gene	Chr15:63773263-63773967 (+)
CBA/J	ENSMUSG00210025188	lncRNA gene	Chr15:64135517-64136221 (+)
DBA/2J	ENSMUSG00185025788	lncRNA gene	Chr15:64079409-64080113 (+)
FVB/NJ	ENSMUSG00205010939	lncRNA gene	Chr15:63802700-63803404 (+)
JF1/MsJ	ENSUMUG00000018202	lncRNA gene	Chr15:63794625-63795329 (+)
LP/J	ENSMUSG00230024976	lncRNA gene	Chr15:67414862-67415566 (+)
NOD/ShiLtJ	ENSMUSG00190004541	lncRNA gene	Chr15:64128784-64129488 (+)
NZO/HlLtJ	ENSMUSG00225027491	lncRNA gene	Chr15:67697424-67698128 (+)
PWK/PhJ	ENSLUMG00010011045	lncRNA gene	Chr15:64078505-64079209 (+)
SPRET/EiJ	ENSMSPG00010004419	lncRNA gene	Chr15:65447811-65448515 (+)
WSB/EiJ	ENSIUOG00005020661	lncRNA gene	Chr15:64140784-64141488 (+)

Homology

• Gene Tree
  Gm56715
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120535 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120535	Ensembl Gene Model | MGI Sequence Detail	1255	C57BL/6J
transcript	ENSMUST00000244046	Ensembl | MGI Sequence Detail	1255	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56715:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr131495	Chr15:67048839-67048904 (+)	37 bp