Gm56706 Gene Detail

Summary

• Symbol
  Gm56706
• Name
  predicted gene, 56706

• Feature Type
  lncRNA gene
• IDs
  MGI:7337326
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr15:80137850-80139196 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337326	lncRNA gene	Chr15:80137850-80139196 (-)
129S1/SvImJ	ENSMUSG00200054047	lncRNA gene	Chr15:77240671-77241982 (-)
A/J	ENSMUSG00195051617	lncRNA gene	Chr15:77185994-77187305 (-)
AKR/J	ENSMUSG00220052983	lncRNA gene	Chr15:77229116-77230427 (-)
BALB/cJ	ENSMUSG00180054179	lncRNA gene	Chr15:77063054-77064365 (-)
C3H/HeJ	ENSMUSG00175053115	lncRNA gene	Chr15:77374154-77375465 (-)
C57BL/6NJ	ENSMUSG00215052990	lncRNA gene	Chr15:77148444-77149757 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048347	lncRNA gene	Chr15:76674771-76676084 (-)
CBA/J	ENSMUSG00210049786	lncRNA gene	Chr15:77149295-77150606 (-)
DBA/2J	ENSMUSG00185052414	lncRNA gene	Chr15:77159100-77160411 (-)
FVB/NJ	ENSMUSG00205051943	lncRNA gene	Chr15:76886544-76887855 (-)
JF1/MsJ	ENSUMUG00000056236	lncRNA gene	Chr15:76736439-76737753 (-)
LP/J	ENSMUSG00230052765	lncRNA gene	Chr15:80489050-80490361 (-)
NOD/ShiLtJ	ENSMUSG00190053774	lncRNA gene	Chr15:77166342-77167653 (-)
NZO/HlLtJ	ENSMUSG00225053593	lncRNA gene	Chr15:80825200-80826508 (-)
PWK/PhJ	ENSLUMG00010052431	lncRNA gene	Chr15:76957085-76958399 (-)
SPRET/EiJ	ENSMSPG00010050660	lncRNA gene	Chr15:78622141-78623460 (-)
WSB/EiJ	ENSIUOG00005050770	lncRNA gene	Chr15:77232620-77233928 (-)

Homology

• Gene Tree
  Gm56706
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120755 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120755	Ensembl Gene Model | MGI Sequence Detail	1347	C57BL/6J
transcript	ENSMUST00000245608	Ensembl | MGI Sequence Detail	1347	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56706:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr135433	Chr15:80140046-80140065 (-)	-860 bp
Tssr135432	Chr15:80139207-80139219 (-)	-17 bp
Tssr135431	Chr15:80139164-80139201 (-)	13 bp