Gm56702 Gene Detail

Summary

• Symbol
  Gm56702
• Name
  predicted gene, 56702

• Feature Type
  lncRNA gene
• IDs
  MGI:7337318
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:79908688-79909377 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337318	lncRNA gene	Chr15:79908688-79909377 (+)
129S1/SvImJ	ENSMUSG00200053869	lncRNA gene	Chr15:77013544-77014231 (+)
A/J	ENSMUSG00195052087	lncRNA gene	Chr15:76959071-76959758 (+)
AKR/J	ENSMUSG00220053099	lncRNA gene	Chr15:77002205-77002892 (+)
BALB/cJ	ENSMUSG00180053590	lncRNA gene	Chr15:76836111-76836798 (+)
C3H/HeJ	ENSMUSG00175053564	lncRNA gene	Chr15:77147272-77147959 (+)
C57BL/6NJ	ENSMUSG00215052739	lncRNA gene	Chr15:76919136-76919823 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048869	lncRNA gene	Chr15:76447298-76447985 (+)
CBA/J	ENSMUSG00210049859	lncRNA gene	Chr15:76922393-76923080 (+)
DBA/2J	ENSMUSG00185052028	lncRNA gene	Chr15:76932306-76932993 (+)
FVB/NJ	ENSMUSG00205052822	lncRNA gene	Chr15:76659625-76660312 (+)
JF1/MsJ	ENSUMUG00000056709	lncRNA gene	Chr15:76508558-76509245 (+)
LP/J	ENSMUSG00230052583	lncRNA gene	Chr15:80261933-80262620 (+)
NOD/ShiLtJ	ENSMUSG00190053981	lncRNA gene	Chr15:76939421-76940108 (+)
NZO/HlLtJ	ENSMUSG00225053638	lncRNA gene	Chr15:80597413-80598100 (+)
PWK/PhJ	ENSLUMG00010052530	lncRNA gene	Chr15:76729256-76729943 (+)
SPRET/EiJ	ENSMSPG00010050511	lncRNA gene	Chr15:78392362-78393049 (+)
WSB/EiJ	ENSIUOG00005050372	lncRNA gene	Chr15:77005050-77005737 (+)

Homology

• Gene Tree
  Gm56702
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120517 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120517	Ensembl Gene Model | MGI Sequence Detail	690	C57BL/6J
transcript	ENSMUST00000243924	Ensembl | MGI Sequence Detail	690	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56702:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr132153	Chr15:79908686-79908691 (+)	1 bp