Gm56695 Gene Detail

Summary

• Symbol
  Gm56695
• Name
  predicted gene, 56695

• Feature Type
  lncRNA gene
• IDs
  MGI:7337304
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:102285368-102285967 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337304	lncRNA gene	Chr15:102285368-102285967 (+)
129S1/SvImJ	ENSMUSG00200052659	lncRNA gene	Chr15:99510589-99511176 (+)
A/J	ENSMUSG00195047588	lncRNA gene	Chr15:99399930-99400517 (+)
AKR/J	ENSMUSG00220049439	lncRNA gene	Chr15:99370697-99371284 (+)
BALB/cJ	ENSMUSG00180047719	lncRNA gene	Chr15:99282923-99283510 (+)
C3H/HeJ	ENSMUSG00175048114	lncRNA gene	Chr15:99601801-99602388 (+)
C57BL/6NJ	ENSMUSG00215051755	lncRNA gene	Chr15:99326362-99326949 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048074	lncRNA gene	Chr15:98806767-98807354 (+)
CBA/J	ENSMUSG00210032800	lncRNA gene	Chr15:99352977-99353564 (+)
DBA/2J	ENSMUSG00185044121	lncRNA gene	Chr15:99370533-99371120 (+)
FVB/NJ	ENSMUSG00205048735	lncRNA gene	Chr15:99075063-99075650 (+)
JF1/MsJ	ENSUMUG00000057184	lncRNA gene	Chr15:98831047-98831664 (+)
LP/J	ENSMUSG00230006912	lncRNA gene	Chr15:102731624-102732211 (+)
NOD/ShiLtJ	ENSMUSG00190049550	lncRNA gene	Chr15:99315399-99315986 (+)
NZO/HlLtJ	ENSMUSG00225028244	lncRNA gene	Chr15:102911457-102912044 (+)
PWK/PhJ	ENSLUMG00010050177	lncRNA gene	Chr15:99042248-99042865 (+)
SPRET/EiJ	ENSMSPG00010050222	lncRNA gene	Chr15:100831891-100832508 (+)
WSB/EiJ	ENSIUOG00005041478	lncRNA gene	Chr15:99460287-99460874 (+)

Homology

• Gene Tree
  Gm56695
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120239 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120239	Ensembl Gene Model | MGI Sequence Detail	600	C57BL/6J
transcript	ENSMUST00000242051	Ensembl | MGI Sequence Detail	600	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56695:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr133384	Chr15:102285389-102285409 (+)	31 bp