Gm56691 Gene Detail

Summary

• Symbol
  Gm56691
• Name
  predicted gene, 56691

• Feature Type
  lncRNA gene
• IDs
  MGI:7337296
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:88723652-88725074 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337296	lncRNA gene	Chr15:88723652-88725074 (+)
129S1/SvImJ	ENSMUSG00200036360	lncRNA gene	Chr15:85875567-85876071 (+)
A/J	ENSMUSG00195020696	lncRNA gene	Chr15:85797163-85797667 (+)
AKR/J	ENSMUSG00220033111	lncRNA gene	Chr15:85827771-85828275 (+)
BALB/cJ	ENSMUSG00180015620	lncRNA gene	Chr15:85651028-85651532 (+)
C3H/HeJ	ENSMUSG00175028313	lncRNA gene	Chr15:85983857-85984361 (+)
C57BL/6NJ	ENSMUSG00215032968	lncRNA gene	Chr15:85744561-85745065 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031366	lncRNA gene	Chr15:85251415-85251919 (+)
CBA/J	ENSMUSG00210013263	lncRNA gene	Chr15:85753334-85753838 (+)
DBA/2J	ENSMUSG00185023309	lncRNA gene	Chr15:85765207-85765711 (+)
FVB/NJ	ENSMUSG00205036490	lncRNA gene	Chr15:85520032-85520536 (+)
JF1/MsJ	ENSUMUG00000044098	lncRNA gene	Chr15:85338379-85338868 (+)
LP/J	ENSMUSG00230045148	lncRNA gene	Chr15:89115773-89116277 (+)
NOD/ShiLtJ	ENSMUSG00190029936	lncRNA gene	Chr15:85773932-85774436 (+)
NZO/HlLtJ	ENSMUSG00225050880	lncRNA gene	Chr15:89432330-89432834 (+)
PWK/PhJ	ENSLUMG00010036310	lncRNA gene	Chr15:85492016-85492505 (+)
SPRET/EiJ	ENSMSPG00010015073	lncRNA gene	Chr15:87194518-87195007 (+)
WSB/EiJ	ENSIUOG00005011717	lncRNA gene	Chr15:85859915-85860419 (+)

Homology

• Gene Tree
  Gm56691
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120014 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120014	Ensembl Gene Model | MGI Sequence Detail	1423	C57BL/6J
transcript	ENSMUST00000241032	Ensembl | MGI Sequence Detail	1423	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56691:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr132617	Chr15:88723679-88723687 (+)	31 bp