Gm56673 Gene Detail

Summary

• Symbol
  Gm56673
• Name
  predicted gene, 56673

• Feature Type
  lncRNA gene
• IDs
  MGI:7337260
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:37363776-37364744 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337260	lncRNA gene	Chr19:37363776-37364744 (-)
129S1/SvImJ	ENSMUSG00200031050	lncRNA gene	Chr19:34154853-34155791 (-)
A/J	ENSMUSG00195012068	lncRNA gene	Chr19:34254348-34255286 (-)
AKR/J	ENSMUSG00220018896	lncRNA gene	Chr19:34137332-34138271 (-)
BALB/cJ	ENSMUSG00180033968	lncRNA gene	Chr19:34582285-34583223 (-)
C3H/HeJ	ENSMUSG00175045038	lncRNA gene	Chr19:34016311-34017249 (-)
C57BL/6NJ	ENSMUSG00215030327	lncRNA gene	Chr19:34028574-34029512 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015583	lncRNA gene	Chr19:33699232-33700153 (-)
CBA/J	ENSMUSG00210036538	lncRNA gene	Chr19:34095561-34096499 (-)
DBA/2J	ENSMUSG00185033307	lncRNA gene	Chr19:34615790-34616728 (-)
FVB/NJ	ENSMUSG00205008560	lncRNA gene	Chr19:33861108-33862046 (-)
JF1/MsJ	ENSUMUG00000047070	lncRNA gene	Chr19:34763397-34764318 (-)
LP/J	ENSMUSG00230036159	lncRNA gene	Chr19:35426715-35427653 (-)
NOD/ShiLtJ	ENSMUSG00190011693	lncRNA gene	Chr19:33992708-33993646 (-)
NZO/HlLtJ	ENSMUSG00225029522	lncRNA gene	Chr19:38976549-38977487 (-)
PWK/PhJ	ENSLUMG00010001452	lncRNA gene	Chr19:34146048-34146969 (-)
SPRET/EiJ	ENSMSPG00010025481	lncRNA gene	Chr19:33872769-33873692 (-)
WSB/EiJ	ENSIUOG00005040152	lncRNA gene	Chr19:33503849-33504787 (-)

Homology

• Gene Tree
  Gm56673
  

Expression

• Literature Summary
  1

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000121027 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121027	Ensembl Gene Model | MGI Sequence Detail	969	C57BL/6J
transcript	ENSMUST00000246911	Ensembl | MGI Sequence Detail	969	Not Applicable

References

• Summaries
  All 2

  Developmental Gene Expression 1
• Earliest
  J:356908 Kutter C, et al., Rapid turnover of long noncoding RNAs and the evolution of gene expression. PLoS Genet. 2012;8(7):e1002841