Gm56656 Gene Detail

Summary

• Symbol
  Gm56656
• Name
  predicted gene, 56656

• Feature Type
  lncRNA gene
• IDs
  MGI:7337226
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:6927792-6928972 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337226	lncRNA gene	Chr19:6927792-6928972 (-)
129S1/SvImJ	ENSMUSG00200053523	lncRNA gene	Chr19:3653303-3654398 (-)
A/J	ENSMUSG00195053287	lncRNA gene	Chr19:4055217-4056312 (-)
AKR/J	ENSMUSG00220050659	lncRNA gene	Chr19:3824650-3825745 (-)
BALB/cJ	ENSMUSG00180052669	lncRNA gene	Chr19:4418788-4419883 (-)
C3H/HeJ	ENSMUSG00175014943	lncRNA gene	Chr19:3675230-3676325 (-)
C57BL/6NJ	ENSMUSG00215048310	lncRNA gene	Chr19:3893734-3894829 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043432	lncRNA gene	Chr19:3796552-3797645 (-)
CBA/J	ENSMUSG00210050587	lncRNA gene	Chr19:3678600-3679695 (-)
DBA/2J	ENSMUSG00185053465	lncRNA gene	Chr19:4055075-4056170 (-)
FVB/NJ	ENSMUSG00205052839	lncRNA gene	Chr19:4054138-4055233 (-)
JF1/MsJ	ENSUMUG00000056803	lncRNA gene	Chr19:4014803-4015898 (-)
LP/J	ENSMUSG00230054165	lncRNA gene	Chr19:4980040-4981135 (-)
NOD/ShiLtJ	ENSMUSG00190053140	lncRNA gene	Chr19:3586503-3587598 (-)
NZO/HlLtJ	ENSMUSG00225027007	lncRNA gene	Chr19:8688854-8689949 (-)
PWK/PhJ	ENSLUMG00010009375	lncRNA gene	Chr19:3779503-3780598 (-)
SPRET/EiJ	ENSMSPG00010051695	lncRNA gene	Chr19:3771696-3772769 (-)
WSB/EiJ	ENSIUOG00005051026	lncRNA gene	Chr19:3692800-3693895 (-)

Homology

• Gene Tree
  Gm56656
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120718 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120718	Ensembl Gene Model | MGI Sequence Detail	1181	C57BL/6J
transcript	ENSMUST00000245398	Ensembl | MGI Sequence Detail	1181	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56656:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr157905	Chr19:6928841-6928882 (-)	110 bp