Gm56632 Gene Detail

Summary

• Symbol
  Gm56632
• Name
  predicted gene, 56632

• Feature Type
  lncRNA gene
• IDs
  MGI:7337178
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr19:5686117-5687730 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337178	lncRNA gene	Chr19:5686117-5687730 (-)
129S1/SvImJ	ENSMUSG00200053208	lncRNA gene	Chr19:2449039-2449721 (-)
A/J	ENSMUSG00195053612	lncRNA gene	Chr19:2843455-2844137 (-)
AKR/J	ENSMUSG00220051629	lncRNA gene	Chr19:2616588-2617270 (-)
BALB/cJ	ENSMUSG00180052095	lncRNA gene	Chr19:3218174-3218856 (-)
C3H/HeJ	ENSMUSG00175014855	lncRNA gene	Chr19:2468385-2469067 (-)
C57BL/6NJ	ENSMUSG00215048859	lncRNA gene	Chr19:2687252-2687934 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045440	lncRNA gene	Chr19:2606149-2606823 (-)
CBA/J	ENSMUSG00210050782	lncRNA gene	Chr19:2471844-2472526 (-)
DBA/2J	ENSMUSG00185052296	lncRNA gene	Chr19:2848319-2849001 (-)
FVB/NJ	ENSMUSG00205053331	lncRNA gene	Chr19:2854573-2855255 (-)
JF1/MsJ	ENSUMUG00000056948	lncRNA gene	Chr19:2824791-2825473 (-)
LP/J	ENSMUSG00230054282	lncRNA gene	Chr19:3755952-3756634 (-)
NOD/ShiLtJ	ENSMUSG00190051806	lncRNA gene	Chr19:2377977-2378659 (-)
NZO/HlLtJ	ENSMUSG00225026791	lncRNA gene	Chr19:7464716-7465398 (-)
PWK/PhJ	ENSLUMG00010008167	lncRNA gene	Chr19:2593002-2593684 (-)
SPRET/EiJ	ENSMSPG00010051450	lncRNA gene	Chr19:2582076-2582764 (-)
WSB/EiJ	ENSIUOG00005051038	lncRNA gene	Chr19:2486433-2487115 (-)

Homology

• Gene Tree
  Gm56632
  

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000120141 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120141	Ensembl Gene Model | MGI Sequence Detail	1614	C57BL/6J
transcript	ENSMUST00000241570	Ensembl | MGI Sequence Detail	1477	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56632:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr157619	Chr19:5688903-5688913 (-)	-1,178 bp
Tssr157618	Chr19:5687403-5687419 (-)	319 bp