Gm56631 Gene Detail

Summary

• Symbol
  Gm56631
• Name
  predicted gene, 56631

• Feature Type
  lncRNA gene
• IDs
  MGI:7337176
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:30163241-30163863 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337176	lncRNA gene	Chr19:30163241-30163863 (+)
129S1/SvImJ	ENSMUSG00200020912	lncRNA gene	Chr19:26897977-26898560 (+)
A/J	ENSMUSG00195037307	lncRNA gene	Chr19:27055234-27055817 (+)
AKR/J	ENSMUSG00220020023	lncRNA gene	Chr19:27112266-27112849 (+)
BALB/cJ	ENSMUSG00180013649	lncRNA gene	Chr19:27387452-27388035 (+)
C3H/HeJ	ENSMUSG00175025598	lncRNA gene	Chr19:26760373-26760956 (+)
C57BL/6NJ	ENSMUSG00215029645	lncRNA gene	Chr19:26800520-26801103 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018501	lncRNA gene	Chr19:26639757-26640341 (+)
CBA/J	ENSMUSG00210014909	lncRNA gene	Chr19:26991292-26991875 (+)
DBA/2J	ENSMUSG00185026119	lncRNA gene	Chr19:27378037-27378620 (+)
FVB/NJ	ENSMUSG00205012841	lncRNA gene	Chr19:26769641-26770224 (+)
JF1/MsJ	ENSUMUG00000038032	lncRNA gene	Chr19:27597757-27598339 (+)
LP/J	ENSMUSG00230028757	lncRNA gene	Chr19:28191552-28192135 (+)
NOD/ShiLtJ	ENSMUSG00190023740	lncRNA gene	Chr19:26754593-26755176 (+)
NZO/HlLtJ	ENSMUSG00225029735	lncRNA gene	Chr19:31947241-31947824 (+)
PWK/PhJ	ENSLUMG00010035009	lncRNA gene	Chr19:26975147-26975730 (+)
SPRET/EiJ	ENSMSPG00010038011	lncRNA gene	Chr19:26953105-26953677 (+)
WSB/EiJ	ENSIUOG00005028244	lncRNA gene	Chr19:26471979-26472563 (+)

Homology

• Gene Tree
  Gm56631
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120075 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120075	Ensembl Gene Model | MGI Sequence Detail	623	C57BL/6J
transcript	ENSMUST00000241248	Ensembl | MGI Sequence Detail	623	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56631:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr155929	Chr19:30163273-30163285 (+)	38 bp