Gm56624 Gene Detail

Summary

• Symbol
  Gm56624
• Name
  predicted gene, 56624

• Feature Type
  lncRNA gene
• IDs
  MGI:7337162
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:55932346-55936697 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  206 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337162	lncRNA gene	Chr16:55932346-55936697 (-)
129S1/SvImJ	ENSMUSG00200021386	lncRNA gene	Chr16:52826221-52830550 (-)
A/J	ENSMUSG00195025713	lncRNA gene	Chr16:52451340-52455669 (-)
AKR/J	ENSMUSG00220020067	lncRNA gene	Chr16:52826520-52830849 (-)
BALB/cJ	ENSMUSG00180025351	lncRNA gene	Chr16:52620812-52625141 (-)
C3H/HeJ	ENSMUSG00175017927	lncRNA gene	Chr16:52916684-52921013 (-)
C57BL/6NJ	ENSMUSG00215025744	lncRNA gene	Chr16:52737902-52742231 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014554	lncRNA gene	Chr16:52943723-52948120 (-)
CBA/J	ENSMUSG00210019660	lncRNA gene	Chr16:52917736-52922130 (-)
DBA/2J	ENSMUSG00185025531	lncRNA gene	Chr16:52800843-52805172 (-)
FVB/NJ	ENSMUSG00205010515	lncRNA gene	Chr16:52583392-52587721 (-)
JF1/MsJ	ENSUMUG00000026371	lncRNA gene	Chr16:53030028-53034422 (-)
LP/J	ENSMUSG00230008896	lncRNA gene	Chr16:55355243-55359572 (-)
NOD/ShiLtJ	ENSMUSG00190007465	lncRNA gene	Chr16:52838955-52843284 (-)
NZO/HlLtJ	ENSMUSG00225026326	lncRNA gene	Chr16:58460688-58465017 (-)
PWK/PhJ	ENSLUMG00010011948	lncRNA gene	Chr16:52841127-52845523 (-)
SPRET/EiJ	ENSMSPG00010001688	lncRNA gene	Chr16:53293166-53297598 (-)
WSB/EiJ	ENSIUOG00005009572	lncRNA gene	Chr16:53045960-53050293 (-)

Homology

• Gene Tree
  Gm56624
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000120961 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120961	Ensembl Gene Model | MGI Sequence Detail	4352	C57BL/6J
transcript	ENSMUST00000246661	Ensembl | MGI Sequence Detail	2023	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;