Gm56615 Gene Detail

Summary

• Symbol
  Gm56615
• Name
  predicted gene, 56615

• Feature Type
  lncRNA gene
• IDs
  MGI:7337144
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:49518392-49519439 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337144	lncRNA gene	Chr16:49518392-49519439 (-)
129S1/SvImJ	ENSMUSG00200021566	lncRNA gene	Chr16:46404674-46405601 (-)
A/J	ENSMUSG00195003491	lncRNA gene	Chr16:46005934-46006861 (-)
AKR/J	ENSMUSG00220022764	lncRNA gene	Chr16:46359239-46360166 (-)
BALB/cJ	ENSMUSG00180029617	lncRNA gene	Chr16:46210578-46211505 (-)
C3H/HeJ	ENSMUSG00175026359	lncRNA gene	Chr16:46484260-46485191 (-)
C57BL/6NJ	ENSMUSG00215008536	lncRNA gene	Chr16:46320071-46320998 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012822	lncRNA gene	Chr16:46619976-46620907 (-)
CBA/J	ENSMUSG00210016835	lncRNA gene	Chr16:46520710-46521641 (-)
DBA/2J	ENSMUSG00185010967	lncRNA gene	Chr16:46390052-46390979 (-)
FVB/NJ	ENSMUSG00205013448	lncRNA gene	Chr16:46294491-46295418 (-)
JF1/MsJ	ENSUMUG00000033098	lncRNA gene	Chr16:46621192-46622112 (-)
LP/J	ENSMUSG00230029370	lncRNA gene	Chr16:48956448-48957375 (-)
NOD/ShiLtJ	ENSMUSG00190019740	lncRNA gene	Chr16:46423247-46424174 (-)
NZO/HlLtJ	ENSMUSG00225026217	lncRNA gene	Chr16:52048217-52049144 (-)
PWK/PhJ	ENSLUMG00010028064	lncRNA gene	Chr16:46444799-46445730 (-)
SPRET/EiJ	ENSMSPG00010007842	lncRNA gene	Chr16:46696946-46697828 (-)
WSB/EiJ	ENSIUOG00005013439	lncRNA gene	Chr16:46597735-46598662 (-)

Homology

• Gene Tree
  Gm56615
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000119969 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119969	Ensembl Gene Model | MGI Sequence Detail	1048	C57BL/6J
transcript	ENSMUST00000240876	Ensembl | MGI Sequence Detail	1048	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56615:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr141323	Chr16:49519370-49519385 (-)	61 bp