Gm56614 Gene Detail

Summary

• Symbol
  Gm56614
• Name
  predicted gene, 56614

• Feature Type
  lncRNA gene
• IDs
  MGI:7337142
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:89515819-89532943 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  864 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337142	lncRNA gene	Chr13:89515819-89532943 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195024393	lncRNA gene	Chr13:84509731-84510846 (-)
AKR/J	ENSMUSG00220014244	lncRNA gene	Chr13:83011797-83012896 (-)
BALB/cJ	ENSMUSG00180016883	lncRNA gene	Chr13:85026583-85027682 (-)
C3H/HeJ	ENSMUSG00175023359	lncRNA gene	Chr13:85228344-85229443 (-)
C57BL/6NJ	ENSMUSG00215003097	lncRNA gene	Chr13:85121908-85123023 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010090	lncRNA gene	Chr13:84344452-84344729 (-)
CBA/J	ENSMUSG00210024752	lncRNA gene	Chr13:84502989-84504088 (-)
DBA/2J	ENSMUSG00185010250	lncRNA gene	Chr13:88194920-88196019 (-)
FVB/NJ	ENSMUSG00205009088	lncRNA gene	Chr13:83953531-83954630 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230004665	lncRNA gene	Chr13:98225072-98226171 (-)
NOD/ShiLtJ	ENSMUSG00190018918	lncRNA gene	Chr13:84872710-84873809 (-)
NZO/HlLtJ	ENSMUSG00225030953	lncRNA gene	Chr13:90742427-90743526 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005031611	lncRNA gene	Chr13:83901602-83902701 (-)

Homology

• Gene Tree
  Gm56614
  

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000121063 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121063	Ensembl Gene Model | MGI Sequence Detail	17125	C57BL/6J
transcript	ENSMUST00000292445	Ensembl | MGI Sequence Detail	1225	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56614:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr123376	Chr13:89532938-89532944 (-)	2 bp