Gm56572 Gene Detail

Summary

• Symbol
  Gm56572
• Name
  predicted gene, 56572

• Feature Type
  lncRNA gene
• IDs
  MGI:7337058
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:36918862-36919519 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337058	lncRNA gene	Chr13:36918862-36919519 (+)
129S1/SvImJ	ENSMUSG00200013914	lncRNA gene	Chr13:34121809-34122466 (+)
A/J	ENSMUSG00195034356	lncRNA gene	Chr13:33213292-33213949 (+)
AKR/J	ENSMUSG00220035160	lncRNA gene	Chr13:33008117-33008774 (+)
BALB/cJ	ENSMUSG00180008228	lncRNA gene	Chr13:33518924-33519581 (+)
C3H/HeJ	ENSMUSG00175015087	lncRNA gene	Chr13:33466078-33466735 (+)
C57BL/6NJ	ENSMUSG00215015412	lncRNA gene	Chr13:33643681-33644338 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038252	lncRNA gene	Chr13:33578428-33579085 (+)
CBA/J	ENSMUSG00210011995	lncRNA gene	Chr13:33478632-33479289 (+)
DBA/2J	ENSMUSG00185034774	lncRNA gene	Chr13:34306694-34307351 (+)
FVB/NJ	ENSMUSG00205032128	lncRNA gene	Chr13:33173981-33174638 (+)
JF1/MsJ	ENSUMUG00000038453	lncRNA gene	Chr13:33907692-33908349 (+)
LP/J	ENSMUSG00230016252	lncRNA gene	Chr13:43622367-43623024 (+)
NOD/ShiLtJ	ENSMUSG00190012096	lncRNA gene	Chr13:33695397-33696054 (+)
NZO/HlLtJ	ENSMUSG00225034819	lncRNA gene	Chr13:37428383-37429034 (+)
PWK/PhJ	ENSLUMG00010029124	lncRNA gene	Chr13:32737830-32738487 (+)
SPRET/EiJ	ENSMSPG00010011336	lncRNA gene	Chr13:32717998-32718656 (+)
WSB/EiJ	ENSIUOG00005028402	lncRNA gene	Chr13:32851901-32852558 (+)

Homology

• Gene Tree
  Gm56572
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120549 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120549	Ensembl Gene Model | MGI Sequence Detail	658	C57BL/6J
transcript	ENSMUST00000244118	Ensembl | MGI Sequence Detail	658	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56572:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr119271	Chr13:36918830-36918841 (+)	-26 bp