Gm56557 Gene Detail

Summary

• Symbol
  Gm56557
• Name
  predicted gene, 56557

• Feature Type
  lncRNA gene
• IDs
  MGI:7337028
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:85570885-85602368 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1009 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337028	lncRNA gene	Chr12:85570885-85602368 (+)
129S1/SvImJ	ENSMUSG00200050844	lncRNA gene	Chr12:77586603-77587378 (+)
A/J	ENSMUSG00195034684	lncRNA gene	Chr12:80206216-80206991 (+)
AKR/J	ENSMUSG00220049431	lncRNA gene	Chr12:78002149-78002924 (+)
BALB/cJ	ENSMUSG00180024701	lncRNA gene	Chr12:79243957-79244732 (+)
C3H/HeJ	ENSMUSG00175041711	lncRNA gene	Chr12:82337023-82337798 (+)
C57BL/6NJ	ENSMUSG00215047164	lncRNA gene	Chr12:78550418-78551193 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032727	lncRNA gene	Chr12:78512163-78512964 (+)
CBA/J	ENSMUSG00210046758	lncRNA gene	Chr12:78750226-78751001 (+)
DBA/2J	ENSMUSG00185002895	lncRNA gene	Chr12:80607489-80608264 (+)
FVB/NJ	ENSMUSG00205040390	lncRNA gene	Chr12:78419015-78419790 (+)
JF1/MsJ	ENSUMUG00000048066	lncRNA gene	Chr12:84593191-84593993 (+)
LP/J	ENSMUSG00230046999	lncRNA gene	Chr12:87669682-87670457 (+)
NOD/ShiLtJ	ENSMUSG00190048452	lncRNA gene	Chr12:77807239-77808014 (+)
NZO/HlLtJ	ENSMUSG00225053348	lncRNA gene	Chr12:89706801-89707576 (+)
PWK/PhJ	ENSLUMG00010028676	lncRNA gene	Chr12:78613239-78614041 (+)
SPRET/EiJ	ENSMSPG00010022143	lncRNA gene	Chr12:80429026-80429828 (+)
WSB/EiJ	ENSIUOG00005045645	lncRNA gene	Chr12:78458911-78459686 (+)

Homology

• Gene Tree
  Gm56557
  

Sequences &
Gene Models

• All Sequences
  37

• Ensembl
  ENSMUSG00000120232 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120232	Ensembl Gene Model | MGI Sequence Detail	31484	C57BL/6J
transcript	ENSMUST00000220590	Ensembl | MGI Sequence Detail	1306	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;