Gm56511 Gene Detail

Summary

• Symbol
  Gm56511
• Name
  predicted gene, 56511

• Feature Type
  lncRNA gene
• IDs
  MGI:7336936
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:58483688-58599042 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3163 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7336936	lncRNA gene	Chr12:58483688-58599042 (+)
129S1/SvImJ	ENSMUSG00200032163	lncRNA gene	Chr12:50379895-50381002 (+)
A/J	ENSMUSG00195001671	lncRNA gene	Chr12:52993499-52994595 (+)
AKR/J	ENSMUSG00220015944	lncRNA gene	Chr12:51050301-51051409 (+)
BALB/cJ	ENSMUSG00180007542	lncRNA gene	Chr12:52007768-52008864 (+)
C3H/HeJ	ENSMUSG00175017682	lncRNA gene	Chr12:55048774-55049870 (+)
C57BL/6NJ	ENSMUSG00215010426	lncRNA gene	Chr12:51330373-51331469 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012482	lncRNA gene	Chr12:51418221-51419325 (+)
CBA/J	ENSMUSG00210014178	lncRNA gene	Chr12:51523038-51524134 (+)
DBA/2J	ENSMUSG00185001517	lncRNA gene	Chr12:53468284-53469380 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000009214	lncRNA gene	Chr12:57532866-57533962 (+)
LP/J	ENSMUSG00230016329	lncRNA gene	Chr12:60497693-60498790 (+)
NOD/ShiLtJ	ENSMUSG00190017205	lncRNA gene	Chr12:50516692-50517788 (+)
NZO/HlLtJ	ENSMUSG00225029678	lncRNA gene	Chr12:62642536-62643633 (+)
PWK/PhJ	ENSLUMG00010002701	lncRNA gene	Chr12:51587758-51588859 (+)
SPRET/EiJ	ENSMSPG00010011517	lncRNA gene	Chr12:53085492-53086587 (+)
WSB/EiJ	ENSIUOG00005001015	lncRNA gene	Chr12:51387343-51388448 (+)

Homology

• Gene Tree
  Gm56511
  

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000120215 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120215	Ensembl Gene Model | MGI Sequence Detail	115355	C57BL/6J
transcript	ENSMUST00000241920	Ensembl | MGI Sequence Detail	1109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;