Gm56506 Gene Detail

Summary

• Symbol
  Gm56506
• Name
  predicted gene, 56506

• Feature Type
  lncRNA gene
• IDs
  MGI:7336926
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:45562953-45694483 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3469 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7336926	lncRNA gene	Chr18:45562953-45694483 (-)
129S1/SvImJ	ENSMUSG00200031390	lncRNA gene	Chr18:42738633-42739908 (-)
A/J	ENSMUSG00195025624	lncRNA gene	Chr18:42882752-42884027 (-)
AKR/J	ENSMUSG00220021507	lncRNA gene	Chr18:42838647-42839922 (-)
BALB/cJ	ENSMUSG00180008032	lncRNA gene	Chr18:43368222-43369497 (-)
C3H/HeJ	ENSMUSG00175011400	lncRNA gene	Chr18:42886829-42888104 (-)
C57BL/6NJ	ENSMUSG00215009285	lncRNA gene	Chr18:42576129-42577404 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014506	lncRNA gene	Chr18:42331969-42333244 (-)
CBA/J	ENSMUSG00210022613	lncRNA gene	Chr18:42933800-42935075 (-)
DBA/2J	ENSMUSG00185029000	lncRNA gene	Chr18:42842551-42843826 (-)
FVB/NJ	ENSMUSG00205016198	lncRNA gene	Chr18:42457667-42458942 (-)
JF1/MsJ	ENSUMUG00000030617	lncRNA gene	Chr18:42891515-42892796 (-)
LP/J	ENSMUSG00230029489	lncRNA gene	Chr18:44915301-44916576 (-)
NOD/ShiLtJ	ENSMUSG00190030236	lncRNA gene	Chr18:42614212-42615487 (-)
NZO/HlLtJ	ENSMUSG00225027706	lncRNA gene	Chr18:44791577-44792852 (-)
PWK/PhJ	ENSLUMG00010022482	lncRNA gene	Chr18:42985658-42986939 (-)
SPRET/EiJ	ENSMSPG00010013859	lncRNA gene	Chr18:43146390-43147664 (-)
WSB/EiJ	ENSIUOG00005009941	lncRNA gene	Chr18:42540388-42541663 (-)

Homology

• Gene Tree
  Gm56506
  

Sequences &
Gene Models

• All Sequences
  35

• Ensembl
  ENSMUSG00000120742 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120742	Ensembl Gene Model | MGI Sequence Detail	131531	C57BL/6J
transcript	ENSMUST00000356232	Ensembl | MGI Sequence Detail	1406	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;