Gm56505 Gene Detail

Summary

• Symbol
  Gm56505
• Name
  predicted gene, 56505

• Feature Type
  lncRNA gene
• IDs
  MGI:7336924
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr18:65346294-65353901 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  279 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7336924	lncRNA gene	Chr18:65346294-65353901 (-)
129S1/SvImJ	ENSMUSG00200025422	lncRNA gene	Chr18:62540689-62541973 (-)
A/J	ENSMUSG00195034898	lncRNA gene	Chr18:62585366-62586650 (-)
AKR/J	ENSMUSG00220023373	lncRNA gene	Chr18:62548769-62550054 (-)
BALB/cJ	ENSMUSG00180012724	lncRNA gene	Chr18:63152346-63153630 (-)
C3H/HeJ	ENSMUSG00175010640	lncRNA gene	Chr18:62756644-62757928 (-)
C57BL/6NJ	ENSMUSG00215023031	lncRNA gene	Chr18:62092553-62093838 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016015	lncRNA gene	Chr18:61757165-61758448 (-)
CBA/J	ENSMUSG00210031509	lncRNA gene	Chr18:62714565-62715849 (-)
DBA/2J	ENSMUSG00185030820	lncRNA gene	Chr18:62619814-62621099 (-)
FVB/NJ	ENSMUSG00205014113	lncRNA gene	Chr18:62089480-62090764 (-)
JF1/MsJ	ENSUMUG00000043950	lncRNA gene	Chr18:62526071-62527355 (-)
LP/J	ENSMUSG00230039849	lncRNA gene	Chr18:64683558-64684842 (-)
NOD/ShiLtJ	ENSMUSG00190008331	lncRNA gene	Chr18:62358705-62359989 (-)
NZO/HlLtJ	ENSMUSG00225030739	lncRNA gene	Chr18:64568999-64570283 (-)
PWK/PhJ	ENSLUMG00010026992	lncRNA gene	Chr18:62925786-62927060 (-)
SPRET/EiJ	ENSMSPG00010040600	lncRNA gene	Chr18:63071457-63072730 (-)
WSB/EiJ	ENSIUOG00005006433	lncRNA gene	Chr18:62149410-62150694 (-)

Homology

• Gene Tree
  Gm56505
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000120682 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120682	Ensembl Gene Model | MGI Sequence Detail	7608	C57BL/6J
transcript	ENSMUST00000344074	Ensembl | MGI Sequence Detail	1368	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56505:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr153687	Chr18:65353893-65353901 (-)	4 bp