Gm56503 Gene Detail

Summary

• Symbol
  Gm56503
• Name
  predicted gene, 56503

• Feature Type
  lncRNA gene
• IDs
  MGI:7336920
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr18:61778947-61779750 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7336920	lncRNA gene	Chr18:61778947-61779750 (-)
129S1/SvImJ	ENSMUSG00200034600	lncRNA gene	Chr18:58944034-58944831 (-)
A/J	ENSMUSG00195005517	lncRNA gene	Chr18:59010255-59011054 (-)
AKR/J	ENSMUSG00220016826	lncRNA gene	Chr18:58999472-59000271 (-)
BALB/cJ	ENSMUSG00180012538	lncRNA gene	Chr18:59577340-59578141 (-)
C3H/HeJ	ENSMUSG00175038325	lncRNA gene	Chr18:59192661-59193462 (-)
C57BL/6NJ	ENSMUSG00215040422	lncRNA gene	Chr18:58512601-58513402 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028519	lncRNA gene	Chr18:58213846-58214623 (-)
CBA/J	ENSMUSG00210033562	lncRNA gene	Chr18:59139945-59140745 (-)
DBA/2J	ENSMUSG00185015839	lncRNA gene	Chr18:59039909-59040710 (-)
FVB/NJ	ENSMUSG00205018816	lncRNA gene	Chr18:58524074-58524882 (-)
JF1/MsJ	ENSUMUG00000038870	lncRNA gene	Chr18:58921420-58922199 (-)
LP/J	ENSMUSG00230039870	lncRNA gene	Chr18:61103659-61104456 (-)
NOD/ShiLtJ	ENSMUSG00190035346	lncRNA gene	Chr18:58797108-58797909 (-)
NZO/HlLtJ	ENSMUSG00225030742	lncRNA gene	Chr18:60977378-60978183 (-)
PWK/PhJ	ENSLUMG00010008778	lncRNA gene	Chr18:59324392-59325177 (-)
SPRET/EiJ	ENSMSPG00010018692	lncRNA gene	Chr18:59561552-59562320 (-)
WSB/EiJ	ENSIUOG00005009990	lncRNA gene	Chr18:58669305-58670108 (-)

Homology

• Gene Tree
  Gm56503
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120623 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120623	Ensembl Gene Model | MGI Sequence Detail	804	C57BL/6J
transcript	ENSMUST00000244667	Ensembl | MGI Sequence Detail	804	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56503:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr153584	Chr18:61779738-61779744 (-)	9 bp
Tssr153583	Chr18:61779387-61779392 (-)	360 bp