Gm56484 Gene Detail

Summary

• Symbol
  Gm56484
• Name
  predicted gene, 56484

• Feature Type
  rRNA gene
• IDs
  MGI:6849426
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:61628524-61628640 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849426	rRNA gene	Chr2:61628524-61628640 (+)
129S1/SvImJ	ENSMUSG00200003220	rRNA gene	Chr2:58698186-58698302 (+)
A/J	ENSMUSG00195005317	rRNA gene	Chr2:58817602-58817718 (+)
AKR/J	ENSMUSG00220007510	rRNA gene	Chr2:58919320-58919436 (+)
BALB/cJ	ENSMUSG00180020767	rRNA gene	Chr2:58773354-58773470 (+)
C3H/HeJ	ENSMUSG00175014337	rRNA gene	Chr2:58842109-58842225 (+)
C57BL/6NJ	ENSMUSG00215009096	rRNA gene	Chr2:58826851-58826967 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023335	rRNA gene	Chr2:58195949-58196065 (+)
CBA/J	ENSMUSG00210035243	rRNA gene	Chr2:58867985-58868101 (+)
DBA/2J	ENSMUSG00185008557	rRNA gene	Chr2:58728154-58728270 (+)
FVB/NJ	ENSMUSG00205021444	rRNA gene	Chr2:58356802-58356918 (+)
JF1/MsJ	ENSUMUG00000024853	rRNA gene	Chr2:58434132-58434248 (+)
LP/J	ENSMUSG00230001749	rRNA gene	Chr2:60581764-60581880 (+)
NOD/ShiLtJ	ENSMUSG00190045110	rRNA gene	Chr2:58806280-58806396 (+)
NZO/HlLtJ	ENSMUSG00225001075	rRNA gene	Chr2:68294715-68294831 (+)
PWK/PhJ	ENSLUMG00010005694	rRNA gene	Chr2:58593931-58594047 (+)
SPRET/EiJ	ENSMSPG00010012044	rRNA gene	Chr2:59792089-59792205 (+)
WSB/EiJ	ENSIUOG00005028240	rRNA gene	Chr2:58911322-58911438 (+)

Homology

• Gene Tree
  Gm56484
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076842 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076842	Ensembl Gene Model | MGI Sequence Detail	117	C57BL/6J
transcript	ENSMUST00020182088	Ensembl | MGI Sequence Detail	117	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;