Gm56481 Gene Detail

Summary

• Symbol
  Gm56481
• Name
  predicted gene, 56481

• Feature Type
  miRNA gene
• IDs
  MGI:6849420
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:52173089-52173238 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849420	miRNA gene	Chr2:52173089-52173238 (+)
129S1/SvImJ	ENSMUSG00200011774	miRNA gene	Chr2:49155278-49155427 (+)
A/J	ENSMUSG00195010423	miRNA gene	Chr2:49304288-49304437 (+)
AKR/J	ENSMUSG00220021099	miRNA gene	Chr2:49436552-49436701 (+)
BALB/cJ	ENSMUSG00180022363	miRNA gene	Chr2:49293830-49293979 (+)
C3H/HeJ	ENSMUSG00175014435	miRNA gene	Chr2:49328633-49328782 (+)
C57BL/6NJ	ENSMUSG00215015499	miRNA gene	Chr2:49339642-49339791 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001562	miRNA gene	Chr2:48838624-48838773 (+)
CBA/J	ENSMUSG00210001164	miRNA gene	Chr2:49341556-49341705 (+)
DBA/2J	ENSMUSG00185002819	miRNA gene	Chr2:49209263-49209412 (+)
FVB/NJ	ENSMUSG00205001958	miRNA gene	Chr2:49005582-49005731 (+)
JF1/MsJ	ENSUMUG00000000728	miRNA gene	Chr2:49031867-49032016 (+)
LP/J	ENSMUSG00230000818	miRNA gene	Chr2:51118403-51118552 (+)
NOD/ShiLtJ	ENSMUSG00190002272	miRNA gene	Chr2:49256802-49256951 (+)
NZO/HlLtJ	ENSMUSG00225000945	miRNA gene	Chr2:58829542-58829691 (+)
PWK/PhJ	ENSLUMG00010004542	miRNA gene	Chr2:49189056-49189205 (+)
SPRET/EiJ	ENSMSPG00010011219	miRNA gene	Chr2:50180170-50180319 (+)
WSB/EiJ	ENSIUOG00005001269	miRNA gene	Chr2:49292720-49292869 (+)

Homology

• Gene Tree
  Gm56481
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075472 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075472	Ensembl Gene Model | MGI Sequence Detail	150	C57BL/6J
transcript	ENSMUST00020183561	Ensembl | MGI Sequence Detail	150	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;