Gm56480 Gene Detail

Summary

• Symbol
  Gm56480
• Name
  predicted gene, 56480

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6849418
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:49796783-49796892 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849418	unclassified non-coding RNA gene	Chr2:49796783-49796892 (-)
129S1/SvImJ	ENSMUSG00200011244	unclassified non-coding RNA gene	Chr2:46772237-46772346 (-)
A/J	ENSMUSG00195010318	unclassified non-coding RNA gene	Chr2:46914332-46914441 (-)
AKR/J	ENSMUSG00220021108	unclassified non-coding RNA gene	Chr2:47046021-47046130 (-)
BALB/cJ	ENSMUSG00180022780	unclassified non-coding RNA gene	Chr2:46907236-46907345 (-)
C3H/HeJ	ENSMUSG00175014109	unclassified non-coding RNA gene	Chr2:46938615-46938724 (-)
C57BL/6NJ	ENSMUSG00215015900	unclassified non-coding RNA gene	Chr2:46952900-46953009 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001550	unclassified non-coding RNA gene	Chr2:46495029-46495138 (-)
CBA/J	ENSMUSG00210001091	unclassified non-coding RNA gene	Chr2:46951905-46952014 (-)
DBA/2J	ENSMUSG00185002891	unclassified non-coding RNA gene	Chr2:46812085-46812194 (-)
FVB/NJ	ENSMUSG00205001916	unclassified non-coding RNA gene	Chr2:46582244-46582353 (-)
JF1/MsJ	ENSUMUG00000000612	unclassified non-coding RNA gene	Chr2:46630310-46630419 (-)
LP/J	ENSMUSG00230000769	unclassified non-coding RNA gene	Chr2:48736846-48736955 (-)
NOD/ShiLtJ	ENSMUSG00190002351	unclassified non-coding RNA gene	Chr2:46867182-46867291 (-)
NZO/HlLtJ	ENSMUSG00225000722	unclassified non-coding RNA gene	Chr2:56443119-56443228 (-)
PWK/PhJ	ENSLUMG00010004479	unclassified non-coding RNA gene	Chr2:46803989-46804098 (-)
SPRET/EiJ	ENSMSPG00010011002	unclassified non-coding RNA gene	Chr2:47749574-47749683 (-)
WSB/EiJ	ENSIUOG00005001287	unclassified non-coding RNA gene	Chr2:46899089-46899198 (-)

Homology

• Gene Tree
  Gm56480
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075205 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075205	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182868	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;