Gm56479 Gene Detail

Summary

• Symbol
  Gm56479
• Name
  predicted gene, 56479

• Feature Type
  miRNA gene
• IDs
  MGI:6849416
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:47431996-47432097 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  196 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849416	miRNA gene	Chr2:47431996-47432097 (+)
129S1/SvImJ	ENSMUSG00200011568	miRNA gene	Chr2:44431956-44432057 (+)
A/J	ENSMUSG00195010509	miRNA gene	Chr2:44527306-44527407 (+)
AKR/J	ENSMUSG00220021206	miRNA gene	Chr2:44653307-44653408 (+)
BALB/cJ	ENSMUSG00180022938	miRNA gene	Chr2:44541367-44541468 (+)
C3H/HeJ	ENSMUSG00175014487	miRNA gene	Chr2:44521494-44521595 (+)
C57BL/6NJ	ENSMUSG00215016748	miRNA gene	Chr2:44586991-44587092 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001710	miRNA gene	Chr2:44159275-44159376 (+)
CBA/J	ENSMUSG00210001183	miRNA gene	Chr2:44565235-44565336 (+)
DBA/2J	ENSMUSG00185002739	miRNA gene	Chr2:44425490-44425591 (+)
FVB/NJ	ENSMUSG00205001865	miRNA gene	Chr2:44218621-44218722 (+)
JF1/MsJ	ENSUMUG00000000774	miRNA gene	Chr2:44270011-44270112 (+)
LP/J	ENSMUSG00230000775	miRNA gene	Chr2:46370527-46370628 (+)
NOD/ShiLtJ	ENSMUSG00190002193	miRNA gene	Chr2:44505567-44505668 (+)
NZO/HlLtJ	ENSMUSG00225000751	miRNA gene	Chr2:54056553-54056654 (+)
PWK/PhJ	ENSLUMG00010004619	miRNA gene	Chr2:44431770-44431871 (+)
SPRET/EiJ	ENSMSPG00010011238	miRNA gene	Chr2:45356764-45356857 (+)
WSB/EiJ	ENSIUOG00005001273	miRNA gene	Chr2:44478562-44478663 (+)

Homology

• Gene Tree
  Gm56479
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075748 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075748	Ensembl Gene Model | MGI Sequence Detail	102	C57BL/6J
transcript	ENSMUST00020182706	Ensembl | MGI Sequence Detail	102	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;