Gm56474 Gene Detail

Summary

• Symbol
  Gm56474
• Name
  predicted gene, 56474

• Feature Type
  snRNA gene
• IDs
  MGI:6849406
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:44318947-44319055 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849406	snRNA gene	Chr2:44318947-44319055 (+)
129S1/SvImJ	ENSMUSG00200011841	snRNA gene	Chr2:41334171-41334279 (+)
A/J	ENSMUSG00195010554	snRNA gene	Chr2:41426792-41426900 (+)
AKR/J	ENSMUSG00220021271	snRNA gene	Chr2:41574377-41574485 (+)
BALB/cJ	ENSMUSG00180022717	snRNA gene	Chr2:41432894-41433002 (+)
C3H/HeJ	ENSMUSG00175014565	snRNA gene	Chr2:41421032-41421140 (+)
C57BL/6NJ	ENSMUSG00215017159	snRNA gene	Chr2:41472781-41472889 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001699	snRNA gene	Chr2:41076823-41076931 (+)
CBA/J	ENSMUSG00210001206	snRNA gene	Chr2:41475050-41475158 (+)
DBA/2J	ENSMUSG00185002793	snRNA gene	Chr2:41335358-41335466 (+)
FVB/NJ	ENSMUSG00205001986	snRNA gene	Chr2:41115369-41115477 (+)
JF1/MsJ	ENSUMUG00000000792	snRNA gene	Chr2:41155391-41155503 (+)
LP/J	ENSMUSG00230000786	snRNA gene	Chr2:43255596-43255704 (+)
NOD/ShiLtJ	ENSMUSG00190002378	snRNA gene	Chr2:41313793-41313901 (+)
NZO/HlLtJ	ENSMUSG00225000784	snRNA gene	Chr2:50966384-50966492 (+)
PWK/PhJ	ENSLUMG00010004725	snRNA gene	Chr2:41343612-41343724 (+)
SPRET/EiJ	ENSMSPG00010011300	snRNA gene	Chr2:42192449-42192561 (+)
WSB/EiJ	ENSIUOG00005001345	snRNA gene	Chr2:41317144-41317252 (+)

Homology

• Gene Tree
  Gm56474
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075923 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075923	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020182556	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;