Gm56470 Gene Detail

Summary

• Symbol
  Gm56470
• Name
  predicted gene, 56470

• Feature Type
  snoRNA gene
• IDs
  MGI:6849398
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:149408114-149408205 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849398	snoRNA gene	Chr2:149408114-149408205 (-)
129S1/SvImJ	ENSMUSG00200031648	snoRNA gene	Chr2:146519908-146519999 (-)
A/J	ENSMUSG00195021990	snoRNA gene	Chr2:146635571-146635662 (-)
AKR/J	ENSMUSG00220047089	snoRNA gene	Chr2:146230716-146230807 (-)
BALB/cJ	ENSMUSG00180045530	snoRNA gene	Chr2:146302364-146302455 (-)
C3H/HeJ	ENSMUSG00175046876	snoRNA gene	Chr2:146849400-146849491 (-)
C57BL/6NJ	ENSMUSG00215037589	snoRNA gene	Chr2:146375737-146375828 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044173	snoRNA gene	Chr2:145494353-145494444 (-)
CBA/J	ENSMUSG00210045446	snoRNA gene	Chr2:146768501-146768592 (-)
DBA/2J	ENSMUSG00185049042	snoRNA gene	Chr2:146408591-146408682 (-)
FVB/NJ	ENSMUSG00205037625	snoRNA gene	Chr2:145557786-145557877 (-)
JF1/MsJ	ENSUMUG00000047217	snoRNA gene	Chr2:146241708-146241799 (-)
LP/J	ENSMUSG00230036910	snoRNA gene	Chr2:148102366-148102457 (-)
NOD/ShiLtJ	ENSMUSG00190042144	snoRNA gene	Chr2:146530477-146530568 (-)
NZO/HlLtJ	ENSMUSG00225005759	snoRNA gene	Chr2:156096772-156096863 (-)
PWK/PhJ	ENSLUMG00010045133	snoRNA gene	Chr2:146221008-146221099 (-)
SPRET/EiJ	ENSMSPG00010028862	snoRNA gene	Chr2:148888623-148888714 (-)
WSB/EiJ	ENSIUOG00005048661	snoRNA gene	Chr2:146218635-146218726 (-)

Homology

• Gene Tree
  Gm56470
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076580 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076580	Ensembl Gene Model | MGI Sequence Detail	92	C57BL/6J
transcript	ENSMUST00020182413	Ensembl | MGI Sequence Detail	92	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;