Gm56448 Gene Detail

Summary

• Symbol
  Gm56448
• Name
  predicted gene, 56448

• Feature Type
  miRNA gene
• IDs
  MGI:6849354
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:87087139-87087248 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  64 from dbSNP Build 142
• Strain Annotations
  27

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849354	miRNA gene	Chr2:87087139-87087248 (-)
129S1/SvImJ	ENSMUSG00200054085	miRNA gene	Chr2:84108230-84108339 (-)
A/J	ENSMUSG00195053954	miRNA gene	Chr2:84198433-84198542 (-)
AKR/J	ENSMUSG00220053008	miRNA gene	Chr2:84103894-84104003 (-)
BALB/cJ	ENSMUSG00180054927	miRNA gene	Chr2:84126159-84126268 (-)
C3H/HeJ	ENSMUSG00175054286	miRNA gene	Chr2:84263593-84263702 (-)
C57BL/6NJ	ENSMUSG00215054023	miRNA gene	Chr2:84193367-84193476 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052929	miRNA gene	Chr2:83615336-83615445 (-)
CAST/EiJ	ENSTCUG00005000370	miRNA gene	Chr3:5076484-5076593 (+)
CAST/EiJ	ENSTCUG00005049724	miRNA gene	Chr7:34665581-34665690 (+)
CAST/EiJ	ENSTCUG00005035343	miRNA gene	Chr7:89091782-89091891 (+)
CAST/EiJ	ENSTCUG00005017689	miRNA gene	Chr9:118098099-118098208 (+)
CAST/EiJ	ENSTCUG00005023253	miRNA gene	Chr17:4329143-4329252 (-)
CBA/J	ENSMUSG00210042501	miRNA gene	Chr2:84291490-84291599 (-)
DBA/2J	ENSMUSG00185057143	miRNA gene	Chr2:84122327-84122436 (-)
FVB/NJ	ENSMUSG00205053143	miRNA gene	Chr2:83467627-83467736 (-)
FVB/NJ	ENSMUSG00205031890	miRNA gene	ChrX:130954559-130954668 (+)
JF1/MsJ	ENSUMUG00000037475	miRNA gene	Chr2:83982289-83982430 (-)
LP/J	ENSMUSG00230046608	miRNA gene	Chr2:85873276-85873385 (-)
LP/J	ENSMUSG00230004184	miRNA gene	Chr14:109869520-109869629 (+)
NOD/ShiLtJ	ENSMUSG00190052252	miRNA gene	Chr2:84187963-84188072 (-)
NOD/ShiLtJ	ENSMUSG00190051785	miRNA gene	Chr3:90597391-90597500 (+)
NOD/ShiLtJ	ENSMUSG00190024034	miRNA gene	Chr3:3393212-3393321 (-)
NZO/HlLtJ	ENSMUSG00225003014	miRNA gene	Chr1:115158845-115158953 (+)
NZO/HlLtJ	ENSMUSG00225001697	miRNA gene	Chr3:7869506-7869615 (-)
NZO/HlLtJ	ENSMUSG00225053551	miRNA gene	Chr2:93783006-93783115 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005053402	miRNA gene	Chr2:84068035-84068144 (-)

Homology

• Gene Tree
  Gm56448
  

Sequences &
Gene Models

• All Sequences
  29

• Ensembl
  ENSMUSG00002076800 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076800	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182258	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;