Gm56446 Gene Detail

Summary

• Symbol
  Gm56446
• Name
  predicted gene, 56446

• Feature Type
  miRNA gene
• IDs
  MGI:6849350
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:172018702-172018844 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849350	miRNA gene	Chr2:172018702-172018844 (+)
129S1/SvImJ	ENSMUSG00200041185	miRNA gene	Chr2:168939652-168939758 (+)
A/J	ENSMUSG00195025851	miRNA gene	Chr2:169267921-169268027 (+)
AKR/J	ENSMUSG00220036293	miRNA gene	Chr2:168563672-168563778 (+)
BALB/cJ	ENSMUSG00180040718	miRNA gene	Chr2:168706536-168706642 (+)
C3H/HeJ	ENSMUSG00175042224	miRNA gene	Chr2:169479006-169479112 (+)
C57BL/6NJ	ENSMUSG00215030061	miRNA gene	Chr2:168909293-168909435 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008997	miRNA gene	Chr2:167810242-167810357 (+)
CBA/J	ENSMUSG00210045312	miRNA gene	Chr2:169386594-169386700 (+)
DBA/2J	ENSMUSG00185027346	miRNA gene	Chr2:169100579-169100685 (+)
FVB/NJ	ENSMUSG00205030876	miRNA gene	Chr2:168153726-168153832 (+)
JF1/MsJ	ENSUMUG00000044147	miRNA gene	Chr2:168799120-168799238 (+)
LP/J	ENSMUSG00230013375	miRNA gene	Chr2:170676119-170676225 (+)
NOD/ShiLtJ	ENSMUSG00190044845	miRNA gene	Chr2:168794197-168794303 (+)
NZO/HlLtJ	ENSMUSG00225004095	miRNA gene	Chr2:178662682-178662788 (+)
PWK/PhJ	ENSLUMG00010038185	miRNA gene	Chr2:168688172-168688299 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005026818	miRNA gene	Chr2:168530077-168530183 (+)

Homology

• Gene Tree
  Gm56446
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075990 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075990	Ensembl Gene Model | MGI Sequence Detail	143	C57BL/6J
transcript	ENSMUST00020182963	Ensembl | MGI Sequence Detail	143	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;