Gm56442 Gene Detail

Summary

• Symbol
  Gm56442
• Name
  predicted gene, 56442

• Feature Type
  miRNA gene
• IDs
  MGI:6849342
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:84758418-84758519 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  29

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849342	miRNA gene	Chr2:84758418-84758519 (+)
129S1/SvImJ	ENSMUSG00200054087	miRNA gene	Chr2:81774959-81775060 (+)
A/J	ENSMUSG00195053701	miRNA gene	Chr2:81887701-81887802 (+)
AKR/J	ENSMUSG00220053010	miRNA gene	Chr2:81766429-81766530 (+)
BALB/cJ	ENSMUSG00180054831	miRNA gene	Chr2:81815536-81815637 (+)
C3H/HeJ	ENSMUSG00175054141	miRNA gene	Chr2:81955101-81955202 (+)
C57BL/6NJ	ENSMUSG00215053758	miRNA gene	Chr2:81860087-81860188 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052601	miRNA gene	Chr2:81306081-81306182 (+)
CBA/J	ENSMUSG00210041440	miRNA gene	Chr2:81983010-81983111 (+)
DBA/2J	ENSMUSG00185057172	miRNA gene	Chr2:81811780-81811881 (+)
FVB/NJ	ENSMUSG00205052934	miRNA gene	Chr2:81192086-81192186 (+)
JF1/MsJ	ENSUMUG00000018768	miRNA gene	ChrX:122223402-122223503 (-)
JF1/MsJ	ENSUMUG00000042323	miRNA gene	Chr12:7483362-7483463 (-)
JF1/MsJ	ENSUMUG00000034588	miRNA gene	Chr2:81727602-81727703 (+)
JF1/MsJ	ENSUMUG00000050119	miRNA gene	Chr2:146852862-146852962 (-)
JF1/MsJ	ENSUMUG00000032889	miRNA gene	Chr11:103431768-103431869 (+)
JF1/MsJ	ENSUMUG00000050147	miRNA gene	Chr2:146854289-146854389 (-)
LP/J	ENSMUSG00230045369	miRNA gene	Chr2:83562854-83562955 (+)
NOD/ShiLtJ	ENSMUSG00190052101	miRNA gene	Chr2:81852355-81852456 (+)
NZO/HlLtJ	ENSMUSG00225003311	miRNA gene	Chr2:91447486-91447587 (+)
PWK/PhJ	ENSLUMG00010017661	miRNA gene	Chr12:7220602-7220703 (-)
PWK/PhJ	ENSLUMG00010041495	miRNA gene	ChrX:87479864-87479965 (-)
PWK/PhJ	ENSLUMG00010047978	miRNA gene	Chr2:146849361-146849461 (-)
PWK/PhJ	ENSLUMG00010047962	miRNA gene	Chr2:146847934-146848034 (-)
PWK/PhJ	ENSLUMG00010016972	miRNA gene	Chr11:102953844-102953945 (+)
PWK/PhJ	ENSLUMG00010033617	miRNA gene	Chr13:21035590-21035689 (+)
PWK/PhJ	ENSLUMG00010051760	miRNA gene	Chr2:81743857-81743958 (+)
SPRET/EiJ	ENSMSPG00010052197	miRNA gene	Chr2:83642482-83642583 (+)
WSB/EiJ	ENSIUOG00005053442	miRNA gene	Chr2:81791129-81791230 (+)

Homology

• Gene Tree
  Gm56442
  

Sequences &
Gene Models

• All Sequences
  31

• Ensembl
  ENSMUSG00002076794 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076794	Ensembl Gene Model | MGI Sequence Detail	102	C57BL/6J
transcript	ENSMUST00020182082	Ensembl | MGI Sequence Detail	102	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;