Gm56417 Gene Detail

Summary

• Symbol
  Gm56417
• Name
  predicted gene, 56417

• Feature Type
  miRNA gene
• IDs
  MGI:6849292
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:108978934-108979043 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  26

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849292	miRNA gene	Chr2:108978934-108979043 (-)
129S1/SvImJ	ENSMUSG00200008605	miRNA gene	Chr2:105841315-105841424 (-)
A/J	ENSMUSG00195031436	miRNA gene	Chr2:105932664-105932773 (-)
AKR/J	ENSMUSG00220005453	miRNA gene	Chr2:105728046-105728155 (-)
BALB/cJ	ENSMUSG00180033904	miRNA gene	Chr2:105727890-105727999 (-)
C3H/HeJ	ENSMUSG00175032885	miRNA gene	Chr2:106131534-106131643 (-)
C57BL/6NJ	ENSMUSG00215030269	miRNA gene	Chr2:105869163-105869272 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006027	miRNA gene	Chr2:105127222-105127331 (-)
CAST/EiJ	ENSTCUG00005024150	miRNA gene	Chr7:47317319-47317428 (+)
CAST/EiJ	ENSTCUG00005043551	miRNA gene	Chr6:125976894-125977003 (+)
CAST/EiJ	ENSTCUG00005024773	miRNA gene	ChrX:143137860-143137967 (+)
CAST/EiJ	ENSTCUG00005011445	miRNA gene	Chr15:40401443-40401551 (+)
CAST/EiJ	ENSTCUG00005043988	miRNA gene	ChrX:53219258-53219367 (+)
CBA/J	ENSMUSG00210041905	miRNA gene	Chr2:106005379-106005488 (-)
DBA/2J	ENSMUSG00185041268	miRNA gene	Chr2:105724365-105724474 (-)
FVB/NJ	ENSMUSG00205020469	miRNA gene	Chr2:105033754-105033863 (-)
JF1/MsJ	ENSUMUG00000004225	miRNA gene	Chr2:105534136-105534245 (-)
LP/J	ENSMUSG00230006679	miRNA gene	Chr2:107519389-107519498 (-)
NOD/ShiLtJ	ENSMUSG00190015874	miRNA gene	Chr2:105944655-105944764 (-)
NOD/ShiLtJ	ENSMUSG00190002497	miRNA gene	Chr14:81501200-81501309 (+)
NOD/ShiLtJ	ENSMUSG00190002852	miRNA gene	Chr1:43691523-43691632 (-)
NOD/ShiLtJ	ENSMUSG00190047978	miRNA gene	Chr14:40298859-40298968 (+)
NZO/HlLtJ	ENSMUSG00225013065	miRNA gene	Chr2:115419316-115419425 (-)
PWK/PhJ	ENSLUMG00010003419	miRNA gene	Chr2:105560004-105560113 (-)
PWK/PhJ	ENSLUMG00010048409	miRNA gene	ChrX:51047965-51048074 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005032772	miRNA gene	Chr2:105582723-105582832 (-)

Homology

• Gene Tree
  Gm56417
  

Sequences &
Gene Models

• All Sequences
  28

• Ensembl
  ENSMUSG00002074908 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074908	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183270	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;