Gm56403 Gene Detail

Summary

• Symbol
  Gm56403
• Name
  predicted gene, 56403

• Feature Type
  miRNA gene
• IDs
  MGI:6849264
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:39080931-39081037 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  61 from dbSNP Build 142
• Strain Annotations
  28

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849264	miRNA gene	Chr7:39080931-39081037 (+)
129S1/SvImJ	ENSMUSG00200026499	miRNA gene	Chr7:26893945-26894051 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175042398	miRNA gene	Chr7:28386500-28386606 (+)
C57BL/6NJ	ENSMUSG00215025314	miRNA gene	Chr7:27345558-27345664 (+)
C57BL/6NJ	ENSMUSG00215002260	miRNA gene	Chr7:43638632-43638935 (+)
C57BL/6NJ	ENSMUSG00215031796	miRNA gene	Chr6:53358776-53358877 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210028477	miRNA gene	Chr7:28405630-28405736 (+)
DBA/2J	ENSMUSG00185002004	miRNA gene	Chr5:40419262-40419363 (-)
DBA/2J	ENSMUSG00185031847	miRNA gene	Chr1:48479718-48479819 (-)
DBA/2J	ENSMUSG00185020635	miRNA gene	Chr6:53758984-53759085 (+)
DBA/2J	ENSMUSG00185050179	miRNA gene	Chr7:31736431-31736537 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000051623	miRNA gene	Chr9:33004885-33005186 (-)
JF1/MsJ	ENSUMUG00000055738	miRNA gene	Chr7:8040780-8040881 (+)
JF1/MsJ	ENSUMUG00000038946	miRNA gene	Chr6:53147701-53147802 (+)
JF1/MsJ	ENSUMUG00000002654	miRNA gene	Chr3:76652188-76652289 (+)
JF1/MsJ	ENSUMUG00000005335	miRNA gene	Chr2:15521613-15521915 (-)
JF1/MsJ	ENSUMUG00000026942	miRNA gene	Chr1:15060892-15060993 (+)
JF1/MsJ	ENSUMUG00000033186	miRNA gene	Chr7:36209536-36209642 (+)
JF1/MsJ	ENSUMUG00000016394	miRNA gene	Chr8:66579612-66579918 (-)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225012189	miRNA gene	Chr7:52325631-52325934 (+)
NZO/HlLtJ	ENSMUSG00225009676	miRNA gene	Chr7:35772042-35772148 (+)
NZO/HlLtJ	ENSMUSG00225014067	miRNA gene	Chr6:56841954-56842055 (+)
PWK/PhJ	ENSLUMG00010000934	miRNA gene	Chr3:41663864-41663965 (+)
PWK/PhJ	ENSLUMG00010023423	miRNA gene	Chr1:14677287-14677388 (+)
PWK/PhJ	ENSLUMG00010006832	miRNA gene	Chr3:76714911-76715012 (+)
PWK/PhJ	ENSLUMG00010024060	miRNA gene	Chr7:27242602-27242708 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005013687	miRNA gene	Chr16:44051828-44051929 (+)
WSB/EiJ	ENSIUOG00005009670	miRNA gene	Chr7:28107562-28107668 (+)

Homology

• Gene Tree
  Gm56403
  

Sequences &
Gene Models

• All Sequences
  30

• Ensembl
  ENSMUSG00002075626 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075626	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020182366	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;