Gm56399 Gene Detail

Summary

• Symbol
  Gm56399
• Name
  predicted gene, 56399

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6849256
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:17498286-17498609 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849256	unclassified non-coding RNA gene	Chr11:17498286-17498609 (+)
129S1/SvImJ	ENSMUSG00200022508	unclassified non-coding RNA gene	Chr11:14535631-14535954 (+)
A/J	ENSMUSG00195005451	unclassified non-coding RNA gene	Chr11:14321487-14321810 (+)
AKR/J	ENSMUSG00220003934	unclassified non-coding RNA gene	Chr11:14436859-14437182 (+)
BALB/cJ	ENSMUSG00180004115	unclassified non-coding RNA gene	Chr11:14326234-14326557 (+)
C3H/HeJ	ENSMUSG00175008164	unclassified non-coding RNA gene	Chr11:14403185-14403508 (+)
C57BL/6NJ	ENSMUSG00215003428	unclassified non-coding RNA gene	Chr11:14432383-14432706 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007432	unclassified non-coding RNA gene	Chr11:14384346-14384669 (+)
CBA/J	ENSMUSG00210009729	unclassified non-coding RNA gene	Chr11:14407482-14407805 (+)
DBA/2J	ENSMUSG00185011729	unclassified non-coding RNA gene	Chr11:14494584-14494907 (+)
FVB/NJ	ENSMUSG00205005393	unclassified non-coding RNA gene	Chr11:14423491-14423814 (+)
JF1/MsJ	ENSUMUG00000006560	unclassified non-coding RNA gene	Chr11:14639882-14640205 (+)
LP/J	ENSMUSG00230004302	unclassified non-coding RNA gene	Chr11:15476972-15477295 (+)
NOD/ShiLtJ	ENSMUSG00190008746	unclassified non-coding RNA gene	Chr11:14490621-14490944 (+)
NZO/HlLtJ	ENSMUSG00225033038	unclassified non-coding RNA gene	Chr11:17493004-17493327 (+)
PWK/PhJ	ENSLUMG00010012259	unclassified non-coding RNA gene	Chr11:14336031-14336354 (+)
SPRET/EiJ	ENSMSPG00010018976	unclassified non-coding RNA gene	Chr11:14566644-14566967 (+)
WSB/EiJ	ENSIUOG00005010318	unclassified non-coding RNA gene	Chr11:14393934-14394257 (+)

Homology

• Gene Tree
  Gm56399
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075230 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075230	Ensembl Gene Model | MGI Sequence Detail	324	C57BL/6J
transcript	ENSMUST00020182060	Ensembl | MGI Sequence Detail	324	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;