Gm56398 Gene Detail

Summary

• Symbol
  Gm56398
• Name
  predicted gene, 56398

• Feature Type
  snRNA gene
• IDs
  MGI:6849254
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:25229663-25229757 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849254	snRNA gene	Chr2:25229663-25229757 (+)
129S1/SvImJ	ENSMUSG00200053071	snRNA gene	Chr2:22213811-22213905 (+)
A/J	ENSMUSG00195050029	snRNA gene	Chr2:22304287-22304381 (+)
AKR/J	ENSMUSG00220053624	snRNA gene	Chr2:22422121-22422215 (+)
BALB/cJ	ENSMUSG00180054435	snRNA gene	Chr2:22315454-22315548 (+)
C3H/HeJ	ENSMUSG00175054025	snRNA gene	Chr2:22279603-22279697 (+)
C57BL/6NJ	ENSMUSG00215049291	snRNA gene	Chr2:22338342-22338436 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053282	snRNA gene	Chr2:22064578-22064672 (+)
CBA/J	ENSMUSG00210017825	snRNA gene	Chr2:22318611-22318705 (+)
DBA/2J	ENSMUSG00185053235	snRNA gene	Chr2:22218514-22218608 (+)
FVB/NJ	ENSMUSG00205051111	snRNA gene	Chr2:22072434-22072528 (+)
JF1/MsJ	ENSUMUG00000056137	snRNA gene	Chr2:22132367-22132461 (+)
LP/J	ENSMUSG00230046346	snRNA gene	Chr2:24149808-24149902 (+)
NOD/ShiLtJ	ENSMUSG00190052827	snRNA gene	Chr2:22309380-22309474 (+)
NZO/HlLtJ	ENSMUSG00225011484	snRNA gene	Chr2:31900221-31900315 (+)
PWK/PhJ	ENSLUMG00010052766	snRNA gene	Chr2:22229985-22230079 (+)
SPRET/EiJ	ENSMSPG00010047861	snRNA gene	Chr2:22918544-22918588 (+)
WSB/EiJ	ENSIUOG00005052617	snRNA gene	Chr2:22176665-22176759 (+)

Homology

• Gene Tree
  Gm56398
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075003 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075003	Ensembl Gene Model | MGI Sequence Detail	95	C57BL/6J
transcript	ENSMUST00020182236	Ensembl | MGI Sequence Detail	95	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;