Gm56396 Gene Detail

Summary

• Symbol
  Gm56396
• Name
  predicted gene, 56396

• Feature Type
  snRNA gene
• IDs
  MGI:6849250
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:166610665-166610767 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849250	snRNA gene	Chr2:166610665-166610767 (+)
129S1/SvImJ	ENSMUSG00200041133	snRNA gene	Chr2:163491687-163491789 (+)
A/J	ENSMUSG00195025336	snRNA gene	Chr2:163837409-163837511 (+)
AKR/J	ENSMUSG00220036888	snRNA gene	Chr2:163156387-163156489 (+)
BALB/cJ	ENSMUSG00180038480	snRNA gene	Chr2:163291051-163291153 (+)
C3H/HeJ	ENSMUSG00175045439	snRNA gene	Chr2:164036073-164036175 (+)
C57BL/6NJ	ENSMUSG00215036285	snRNA gene	Chr2:163485811-163485913 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009215	snRNA gene	Chr2:162384968-162385070 (+)
CBA/J	ENSMUSG00210044810	snRNA gene	Chr2:163971444-163971546 (+)
DBA/2J	ENSMUSG00185026929	snRNA gene	Chr2:163696893-163696995 (+)
FVB/NJ	ENSMUSG00205031948	snRNA gene	Chr2:162718040-162718142 (+)
JF1/MsJ	ENSUMUG00000047827	snRNA gene	Chr2:163332981-163333083 (+)
LP/J	ENSMUSG00230013516	snRNA gene	Chr2:165252574-165252676 (+)
NOD/ShiLtJ	ENSMUSG00190042546	snRNA gene	Chr2:163376392-163376494 (+)
NZO/HlLtJ	ENSMUSG00225003276	snRNA gene	Chr2:173263696-173263798 (+)
PWK/PhJ	ENSLUMG00010048699	snRNA gene	Chr2:163243541-163243643 (+)
SPRET/EiJ	ENSMSPG00010030298	snRNA gene	Chr2:165998536-165998638 (+)
WSB/EiJ	ENSIUOG00005027121	snRNA gene	Chr2:163086321-163086423 (+)

Homology

• Gene Tree
  Gm56396
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076611 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076611	Ensembl Gene Model | MGI Sequence Detail	103	C57BL/6J
transcript	ENSMUST00020182625	Ensembl | MGI Sequence Detail	103	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;