Gm56394 Gene Detail

Summary

• Symbol
  Gm56394
• Name
  predicted gene, 56394

• Feature Type
  rRNA gene
• IDs
  MGI:6849246
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:166496947-166497062 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849246	rRNA gene	Chr2:166496947-166497062 (-)
129S1/SvImJ	ENSMUSG00200040629	rRNA gene	Chr2:163373003-163373118 (-)
A/J	ENSMUSG00195025200	rRNA gene	Chr2:163723672-163723787 (-)
AKR/J	ENSMUSG00220036343	rRNA gene	Chr2:163043033-163043148 (-)
BALB/cJ	ENSMUSG00180040162	rRNA gene	Chr2:163177317-163177432 (-)
C3H/HeJ	ENSMUSG00175041171	rRNA gene	Chr2:163922338-163922453 (-)
C57BL/6NJ	ENSMUSG00215029297	rRNA gene	Chr2:163372080-163372195 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009507	rRNA gene	Chr2:162271331-162271446 (-)
CBA/J	ENSMUSG00210045452	rRNA gene	Chr2:163857729-163857844 (-)
DBA/2J	ENSMUSG00185026437	rRNA gene	Chr2:163583541-163583656 (-)
FVB/NJ	ENSMUSG00205031254	rRNA gene	Chr2:162604300-162604415 (-)
JF1/MsJ	ENSUMUG00000044633	rRNA gene	Chr2:163218743-163218858 (-)
LP/J	ENSMUSG00230013899	rRNA gene	Chr2:165133920-165134035 (-)
NOD/ShiLtJ	ENSMUSG00190041577	rRNA gene	Chr2:163262671-163262786 (-)
NZO/HlLtJ	ENSMUSG00225053860	rRNA gene	Chr2:173150383-173150498 (-)
PWK/PhJ	ENSLUMG00010047601	rRNA gene	Chr2:163127709-163127824 (-)
SPRET/EiJ	ENSMSPG00010030038	rRNA gene	Chr2:165885455-165885570 (-)
WSB/EiJ	ENSIUOG00005025911	rRNA gene	Chr2:162972988-162973103 (-)

Homology

• Gene Tree
  Gm56394
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075220 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075220	Ensembl Gene Model | MGI Sequence Detail	116	C57BL/6J
transcript	ENSMUST00020181812	Ensembl | MGI Sequence Detail	116	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;