Gm56389 Gene Detail

Summary

• Symbol
  Gm56389
• Name
  predicted gene, 56389

• Feature Type
  miRNA gene
• IDs
  MGI:6849236
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:103065013-103065133 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849236	miRNA gene	Chr7:103065013-103065133 (+)
129S1/SvImJ	ENSMUSG00200050385	miRNA gene	Chr7:89914931-89915051 (+)
A/J	ENSMUSG00195054726	miRNA gene	Chr7:94414660-94414780 (+)
AKR/J	ENSMUSG00220051625	miRNA gene	Chr7:87784206-87784326 (+)
BALB/cJ	ENSMUSG00180045148	miRNA gene	Chr7:91097774-91097894 (+)
C3H/HeJ	ENSMUSG00175052555	miRNA gene	Chr7:91739167-91739287 (+)
C57BL/6NJ	ENSMUSG00215038149	miRNA gene	Chr7:90912339-90912459 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053267	miRNA gene	Chr7:94273691-94273811 (+)
CBA/J	no annotation
DBA/2J	ENSMUSG00185057149	miRNA gene	Chr7:95917384-95917504 (+)
FVB/NJ	ENSMUSG00205048489	miRNA gene	Chr7:91552501-91552621 (+)
JF1/MsJ	ENSUMUG00000051988	miRNA gene	Chr7:100800489-100800609 (+)
LP/J	ENSMUSG00230048288	miRNA gene	Chr7:102019662-102019782 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225051649	miRNA gene	Chr7:100247841-100247961 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005050467	miRNA gene	Chr7:92156204-92156324 (+)

Homology

• Gene Tree
  Gm56389
  

Sequences &
Gene Models

• All Sequences
  16

• Ensembl
  ENSMUSG00002076059 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076059	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020182916	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;