Gm56380 Gene Detail

Summary

• Symbol
  Gm56380
• Name
  predicted gene, 56380

• Feature Type
  miRNA gene
• IDs
  MGI:6849218
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:102916322-102916442 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  71 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849218	miRNA gene	Chr7:102916322-102916442 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195054854	miRNA gene	Chr7:94264964-94265084 (-)
AKR/J	ENSMUSG00220051784	miRNA gene	Chr7:87777967-87778030 (+)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175051810	miRNA gene	Chr7:91589476-91589596 (-)
C57BL/6NJ	ENSMUSG00215034009	miRNA gene	Chr7:90763639-90763759 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053206	miRNA gene	Chr7:94129478-94129598 (-)
CBA/J	ENSMUSG00210046924	miRNA gene	Chr7:91451912-91452032 (-)
DBA/2J	ENSMUSG00185057052	miRNA gene	Chr7:95767683-95767803 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000052671	miRNA gene	Chr7:100647664-100647784 (-)
LP/J	ENSMUSG00230048262	miRNA gene	Chr7:101869969-101870089 (-)
NOD/ShiLtJ	ENSMUSG00190046628	miRNA gene	Chr7:91810430-91810550 (+)
NZO/HlLtJ	ENSMUSG00225051622	miRNA gene	Chr7:100089198-100089318 (-)
PWK/PhJ	ENSLUMG00010051089	miRNA gene	Chr7:89881436-89881556 (-)
SPRET/EiJ	ENSMSPG00010013993	miRNA gene	Chr18:50918067-50918186 (-)
SPRET/EiJ	ENSMSPG00010043190	miRNA gene	Chr7:91294502-91294622 (+)
WSB/EiJ	ENSIUOG00005049714	miRNA gene	Chr7:92017965-92018085 (-)

Homology

• Gene Tree
  Gm56380
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002076523 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076523	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020182941	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;