Gm56365 Gene Detail

Summary

• Symbol
  Gm56365
• Name
  predicted gene, 56365

• Feature Type
  rRNA gene
• IDs
  MGI:6849188
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:72171842-72171957 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849188	rRNA gene	Chr11:72171842-72171957 (+)
129S1/SvImJ	ENSMUSG00200049841	rRNA gene	Chr11:69217377-69217492 (+)
A/J	ENSMUSG00195053024	rRNA gene	Chr11:69143006-69143121 (+)
AKR/J	ENSMUSG00220054239	rRNA gene	Chr11:69389752-69389867 (+)
BALB/cJ	ENSMUSG00180053844	rRNA gene	Chr11:69311428-69311543 (+)
C3H/HeJ	ENSMUSG00175054538	rRNA gene	Chr11:69258726-69258841 (+)
C57BL/6NJ	ENSMUSG00215055153	rRNA gene	Chr11:68942349-68942464 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053675	rRNA gene	Chr11:68804531-68804646 (+)
CBA/J	ENSMUSG00210054334	rRNA gene	Chr11:69112728-69112843 (+)
DBA/2J	ENSMUSG00185056906	rRNA gene	Chr11:69401844-69401959 (+)
FVB/NJ	ENSMUSG00205053952	rRNA gene	Chr11:69229973-69230088 (+)
JF1/MsJ	ENSUMUG00000057111	rRNA gene	Chr11:69800608-69800723 (+)
LP/J	ENSMUSG00230053794	rRNA gene	Chr11:70428405-70428520 (+)
NOD/ShiLtJ	ENSMUSG00190054168	rRNA gene	Chr11:69385792-69385907 (+)
NZO/HlLtJ	ENSMUSG00225039714	rRNA gene	Chr11:72605147-72605262 (+)
PWK/PhJ	ENSLUMG00010053728	rRNA gene	Chr11:69277312-69277427 (+)
SPRET/EiJ	ENSMSPG00010049792	rRNA gene	Chr11:69840075-69840190 (+)
WSB/EiJ	ENSIUOG00005052728	rRNA gene	Chr11:69341429-69341544 (+)

Homology

• Gene Tree
  Gm56365
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074889 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074889	Ensembl Gene Model | MGI Sequence Detail	116	C57BL/6J
transcript	ENSMUST00020182481	Ensembl | MGI Sequence Detail	116	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;