Gm56346 Gene Detail

Summary

• Symbol
  Gm56346
• Name
  predicted gene, 56346

• Feature Type
  rRNA gene
• IDs
  MGI:6849150
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:6223311-6223424 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849150	rRNA gene	Chr11:6223311-6223424 (+)
129S1/SvImJ	ENSMUSG00200034729	rRNA gene	Chr11:3156695-3156808 (+)
A/J	ENSMUSG00195024413	rRNA gene	Chr11:3080478-3080591 (+)
AKR/J	ENSMUSG00220009498	rRNA gene	Chr11:3109772-3109885 (+)
BALB/cJ	ENSMUSG00180028175	rRNA gene	Chr11:3105539-3105652 (+)
C3H/HeJ	ENSMUSG00175010773	rRNA gene	Chr11:3091237-3091350 (+)
C57BL/6NJ	ENSMUSG00215033392	rRNA gene	Chr11:3112600-3112713 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040884	rRNA gene	Chr11:3175707-3175820 (+)
CBA/J	ENSMUSG00210018527	rRNA gene	Chr11:3101620-3101733 (+)
DBA/2J	ENSMUSG00185019217	rRNA gene	Chr11:3199400-3199513 (+)
FVB/NJ	ENSMUSG00205037824	rRNA gene	Chr11:3072606-3072719 (+)
JF1/MsJ	ENSUMUG00000047696	rRNA gene	Chr11:3340913-3341026 (+)
LP/J	ENSMUSG00230035296	rRNA gene	Chr11:4257812-4257925 (+)
NOD/ShiLtJ	ENSMUSG00190039934	rRNA gene	Chr11:3072998-3073111 (+)
NZO/HlLtJ	ENSMUSG00225026154	rRNA gene	Chr11:6304264-6304377 (+)
PWK/PhJ	ENSLUMG00010019639	rRNA gene	Chr11:3084246-3084359 (+)
SPRET/EiJ	ENSMSPG00010009239	rRNA gene	Chr11:3149559-3149672 (+)
WSB/EiJ	ENSIUOG00005007602	rRNA gene	Chr11:3104273-3104386 (+)

Homology

• Gene Tree
  Gm56346
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076960 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076960	Ensembl Gene Model | MGI Sequence Detail	114	C57BL/6J
transcript	ENSMUST00020183494	Ensembl | MGI Sequence Detail	114	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;