Gm56327 Gene Detail

Summary

• Symbol
  Gm56327
• Name
  predicted gene, 56327

• Feature Type
  snRNA gene
• IDs
  MGI:6849112
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:144484742-144484848 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849112	snRNA gene	Chr1:144484742-144484848 (-)
129S1/SvImJ	ENSMUSG00200008707	snRNA gene	Chr1:141953240-141953346 (-)
A/J	ENSMUSG00195018152	snRNA gene	Chr1:141280733-141280839 (-)
AKR/J	ENSMUSG00220003659	snRNA gene	Chr1:141028565-141028671 (-)
BALB/cJ	ENSMUSG00180011903	snRNA gene	Chr1:141489317-141489423 (-)
C3H/HeJ	ENSMUSG00175007009	snRNA gene	Chr1:141498180-141498286 (-)
C57BL/6NJ	ENSMUSG00215022045	snRNA gene	Chr1:141418693-141418799 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013425	snRNA gene	Chr1:140209280-140209391 (-)
CBA/J	ENSMUSG00210014540	snRNA gene	Chr1:141418874-141418980 (-)
DBA/2J	ENSMUSG00185007290	snRNA gene	Chr1:145737917-145738023 (-)
FVB/NJ	ENSMUSG00205002651	snRNA gene	Chr1:140634472-140634578 (-)
JF1/MsJ	ENSUMUG00000012826	snRNA gene	Chr1:145046648-145046754 (-)
LP/J	ENSMUSG00230000461	snRNA gene	Chr1:145251361-145251467 (-)
NOD/ShiLtJ	ENSMUSG00190002956	snRNA gene	Chr1:141252633-141252739 (-)
NZO/HlLtJ	ENSMUSG00225000098	snRNA gene	Chr1:149011867-149011973 (-)
PWK/PhJ	ENSLUMG00010002033	snRNA gene	Chr1:140332619-140332725 (-)
SPRET/EiJ	ENSMSPG00010012702	snRNA gene	Chr1:143300346-143300457 (-)
WSB/EiJ	ENSIUOG00005029002	snRNA gene	Chr1:140829607-140829713 (-)

Homology

• Gene Tree
  Gm56327
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075314 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075314	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020183004	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56327:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr14112	Chr1:144484844-144484852 (-)	0 bp