Gm56310 Gene Detail

Summary

• Symbol
  Gm56310
• Name
  predicted gene, 56310

• Feature Type
  rRNA gene
• IDs
  MGI:6849078
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:73802869-73802994 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849078	rRNA gene	Chr1:73802869-73802994 (+)
129S1/SvImJ	ENSMUSG00200035571	rRNA gene	Chr1:71459936-71460061 (+)
A/J	ENSMUSG00195031552	rRNA gene	Chr1:70886351-70886476 (+)
AKR/J	ENSMUSG00220010522	rRNA gene	Chr1:71024963-71025088 (+)
BALB/cJ	ENSMUSG00180019823	rRNA gene	Chr1:71144745-71144870 (+)
C3H/HeJ	ENSMUSG00175017853	rRNA gene	Chr1:71285855-71285980 (+)
C57BL/6NJ	ENSMUSG00215029299	rRNA gene	Chr1:71190576-71190701 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028911	rRNA gene	Chr1:70934178-70934303 (+)
CBA/J	ENSMUSG00210043547	rRNA gene	Chr1:70970467-70970592 (+)
DBA/2J	ENSMUSG00185033153	rRNA gene	Chr1:72061663-72061788 (+)
FVB/NJ	ENSMUSG00205016345	rRNA gene	Chr1:70620232-70620357 (+)
JF1/MsJ	ENSUMUG00000006507	rRNA gene	Chr1:70977096-70977221 (+)
LP/J	ENSMUSG00230013770	rRNA gene	Chr1:72051025-72051150 (+)
NOD/ShiLtJ	ENSMUSG00190039347	rRNA gene	Chr1:71195560-71195685 (+)
NZO/HlLtJ	ENSMUSG00225040630	rRNA gene	Chr1:75272406-75272531 (+)
PWK/PhJ	ENSLUMG00010008021	rRNA gene	Chr1:70551885-70552010 (+)
SPRET/EiJ	ENSMSPG00010020332	rRNA gene	Chr1:72633118-72633243 (+)
WSB/EiJ	ENSIUOG00005013974	rRNA gene	Chr1:70827924-70828049 (+)

Homology

• Gene Tree
  Gm56310
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076885 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076885	Ensembl Gene Model | MGI Sequence Detail	126	C57BL/6J
transcript	ENSMUST00020183688	Ensembl | MGI Sequence Detail	126	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;