Gm56309 Gene Detail

Summary

• Symbol
  Gm56309
• Name
  predicted gene, 56309

• Feature Type
  rRNA gene
• IDs
  MGI:6849076
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:131606826-131606948 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849076	rRNA gene	Chr5:131606826-131606948 (+)
129S1/SvImJ	ENSMUSG00200047945	rRNA gene	Chr5:125380172-125380294 (+)
A/J	ENSMUSG00195051197	rRNA gene	Chr5:124895874-124895996 (+)
AKR/J	ENSMUSG00220051020	rRNA gene	Chr5:124364011-124364133 (+)
BALB/cJ	ENSMUSG00180046815	rRNA gene	Chr5:125003115-125003237 (+)
C3H/HeJ	ENSMUSG00175040667	rRNA gene	Chr5:126963365-126963487 (+)
C57BL/6NJ	ENSMUSG00215049961	rRNA gene	Chr5:125036302-125036424 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011114	rRNA gene	Chr5:124261585-124261707 (+)
CBA/J	ENSMUSG00210008745	rRNA gene	Chr5:125721008-125721130 (+)
DBA/2J	ENSMUSG00185007953	rRNA gene	Chr5:128766309-128766431 (+)
FVB/NJ	ENSMUSG00205049921	rRNA gene	Chr5:124651966-124652088 (+)
JF1/MsJ	ENSUMUG00000053435	rRNA gene	Chr5:131681593-131681715 (+)
LP/J	ENSMUSG00230049255	rRNA gene	Chr5:132877826-132877948 (+)
NOD/ShiLtJ	ENSMUSG00190048015	rRNA gene	Chr5:124689678-124689800 (+)
NZO/HlLtJ	ENSMUSG00225014486	rRNA gene	Chr5:140561498-140561620 (+)
PWK/PhJ	ENSLUMG00010019101	rRNA gene	Chr5:123549764-123549886 (+)
SPRET/EiJ	ENSMSPG00010035441	rRNA gene	Chr5:126959978-126960100 (+)
WSB/EiJ	ENSIUOG00005036494	rRNA gene	Chr5:127338388-127338510 (+)

Homology

• Gene Tree
  Gm56309
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076379 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076379	Ensembl Gene Model | MGI Sequence Detail	123	C57BL/6J
transcript	ENSMUST00020183646	Ensembl | MGI Sequence Detail	123	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;