Gm56294 Gene Detail

Summary

• Symbol
  Gm56294
• Name
  predicted gene, 56294

• Feature Type
  rRNA gene
• IDs
  MGI:6849046
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:107742571-107742682 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849046	rRNA gene	Chr11:107742571-107742682 (+)
129S1/SvImJ	ENSMUSG00200033937	rRNA gene	Chr11:105050003-105050114 (+)
A/J	ENSMUSG00195022215	rRNA gene	Chr11:104752909-104753020 (+)
AKR/J	ENSMUSG00220036077	rRNA gene	Chr11:104965735-104965846 (+)
BALB/cJ	ENSMUSG00180020612	rRNA gene	Chr11:105075092-105075203 (+)
C3H/HeJ	ENSMUSG00175013970	rRNA gene	Chr11:105024058-105024169 (+)
C57BL/6NJ	ENSMUSG00215022659	rRNA gene	Chr11:104588872-104588983 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041654	rRNA gene	Chr11:104485678-104485789 (+)
CBA/J	ENSMUSG00210013883	rRNA gene	Chr11:104729479-104729590 (+)
DBA/2J	ENSMUSG00185021443	rRNA gene	Chr11:105073809-105073920 (+)
FVB/NJ	ENSMUSG00205038196	rRNA gene	Chr11:104870838-104870949 (+)
JF1/MsJ	ENSUMUG00000031986	rRNA gene	Chr11:105347734-105347845 (+)
LP/J	ENSMUSG00230035046	rRNA gene	Chr11:106125763-106125874 (+)
NOD/ShiLtJ	ENSMUSG00190025162	rRNA gene	Chr11:105072300-105072411 (+)
NZO/HlLtJ	ENSMUSG00225052569	rRNA gene	Chr11:108170485-108170596 (+)
PWK/PhJ	ENSLUMG00010016942	rRNA gene	Chr11:104863956-104864067 (+)
SPRET/EiJ	ENSMSPG00010037708	rRNA gene	Chr11:105356214-105356325 (+)
WSB/EiJ	ENSIUOG00005018204	rRNA gene	Chr11:104854912-104855023 (+)

Homology

• Gene Tree
  Gm56294
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076898 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076898	Ensembl Gene Model | MGI Sequence Detail	112	C57BL/6J
transcript	ENSMUST00020182975	Ensembl | MGI Sequence Detail	112	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;