Gm56290 Gene Detail

Summary

• Symbol
  Gm56290
• Name
  predicted gene, 56290

• Feature Type
  rRNA gene
• IDs
  MGI:6849038
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:48762851-48762962 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849038	rRNA gene	Chr4:48762851-48762962 (-)
129S1/SvImJ	ENSMUSG00200003710	rRNA gene	Chr4:44845831-44845942 (-)
A/J	ENSMUSG00195006470	rRNA gene	Chr4:45258163-45258274 (-)
AKR/J	ENSMUSG00220002882	rRNA gene	Chr4:44985179-44985290 (-)
BALB/cJ	ENSMUSG00180030745	rRNA gene	Chr4:44844809-44844920 (-)
C3H/HeJ	ENSMUSG00175021227	rRNA gene	Chr4:44994013-44994124 (-)
C57BL/6NJ	ENSMUSG00215023419	rRNA gene	Chr4:44791778-44791889 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038980	rRNA gene	Chr4:45052613-45052724 (-)
CBA/J	ENSMUSG00210019607	rRNA gene	Chr4:44693658-44693769 (-)
DBA/2J	ENSMUSG00185033128	rRNA gene	Chr4:45057171-45057282 (-)
FVB/NJ	ENSMUSG00205024258	rRNA gene	Chr4:44354084-44354195 (-)
JF1/MsJ	ENSUMUG00000039298	rRNA gene	Chr4:45295818-45295929 (-)
LP/J	ENSMUSG00230043360	rRNA gene	Chr4:48640859-48640970 (-)
NOD/ShiLtJ	ENSMUSG00190027476	rRNA gene	Chr4:44926484-44926595 (-)
NZO/HlLtJ	ENSMUSG00225003371	rRNA gene	Chr4:53226957-53227068 (-)
PWK/PhJ	ENSLUMG00010012851	rRNA gene	Chr4:44302817-44302928 (-)
SPRET/EiJ	ENSMSPG00010009463	rRNA gene	Chr4:45218806-45218917 (-)
WSB/EiJ	ENSIUOG00005004651	rRNA gene	Chr4:44685305-44685416 (-)

Homology

• Gene Tree
  Gm56290
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075470 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075470	Ensembl Gene Model | MGI Sequence Detail	112	C57BL/6J
transcript	ENSMUST00020183801	Ensembl | MGI Sequence Detail	112	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;