Gm56280 Gene Detail

Summary

• Symbol
  Gm56280
• Name
  predicted gene, 56280

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6849018
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:100577188-100577366 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849018	unclassified non-coding RNA gene	Chr5:100577188-100577366 (+)
129S1/SvImJ	ENSMUSG00200006797	unclassified non-coding RNA gene	Chr5:94319079-94319257 (+)
A/J	ENSMUSG00195036349	unclassified non-coding RNA gene	Chr5:93884993-93885171 (+)
AKR/J	ENSMUSG00220038306	unclassified non-coding RNA gene	Chr5:93354489-93354667 (+)
BALB/cJ	ENSMUSG00180036543	unclassified non-coding RNA gene	Chr5:94041146-94041324 (+)
C3H/HeJ	ENSMUSG00175034563	unclassified non-coding RNA gene	Chr5:96145759-96145937 (+)
C57BL/6NJ	ENSMUSG00215025146	unclassified non-coding RNA gene	Chr5:93962732-93962910 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024704	unclassified non-coding RNA gene	Chr5:93354892-93355071 (+)
CBA/J	ENSMUSG00210035541	unclassified non-coding RNA gene	Chr5:94896080-94896258 (+)
DBA/2J	ENSMUSG00185038020	unclassified non-coding RNA gene	Chr5:97814428-97814606 (+)
FVB/NJ	ENSMUSG00205044080	unclassified non-coding RNA gene	Chr5:93791246-93791424 (+)
JF1/MsJ	ENSUMUG00000046480	unclassified non-coding RNA gene	Chr5:100778627-100778806 (+)
LP/J	ENSMUSG00230033466	unclassified non-coding RNA gene	Chr5:101860751-101860929 (+)
NOD/ShiLtJ	ENSMUSG00190029629	unclassified non-coding RNA gene	Chr5:93793259-93793437 (+)
NZO/HlLtJ	ENSMUSG00225013331	unclassified non-coding RNA gene	Chr5:109630258-109630436 (+)
PWK/PhJ	ENSLUMG00010016741	unclassified non-coding RNA gene	Chr5:92902581-92902760 (+)
SPRET/EiJ	ENSMSPG00010026520	unclassified non-coding RNA gene	Chr5:95786977-95787156 (+)
WSB/EiJ	ENSIUOG00005031645	unclassified non-coding RNA gene	Chr5:96529296-96529474 (+)

Homology

• Gene Tree
  Gm56280
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075511 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075511	Ensembl Gene Model | MGI Sequence Detail	179	C57BL/6J
transcript	ENSMUST00020182683	Ensembl | MGI Sequence Detail	179	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;