Gm56273 Gene Detail

Summary

• Symbol
  Gm56273
• Name
  predicted gene, 56273

• Feature Type
  miRNA gene
• IDs
  MGI:6849004
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:45396994-45397118 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6849004	miRNA gene	Chr4:45396994-45397118 (-)
129S1/SvImJ	ENSMUSG00200003471	miRNA gene	Chr4:41451832-41451956 (-)
A/J	ENSMUSG00195006623	miRNA gene	Chr4:41911834-41911958 (-)
AKR/J	ENSMUSG00220002759	miRNA gene	Chr4:41596265-41596389 (-)
BALB/cJ	ENSMUSG00180030170	miRNA gene	Chr4:41498517-41498641 (-)
C3H/HeJ	ENSMUSG00175021263	miRNA gene	Chr4:41642748-41642872 (-)
C57BL/6NJ	ENSMUSG00215023203	miRNA gene	Chr4:41419540-41419664 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038888	miRNA gene	Chr4:41673107-41673225 (-)
CBA/J	ENSMUSG00210019568	miRNA gene	Chr4:41332979-41333103 (-)
DBA/2J	ENSMUSG00185034787	miRNA gene	Chr4:41696380-41696504 (-)
FVB/NJ	ENSMUSG00205022680	miRNA gene	Chr4:40965272-40965396 (-)
JF1/MsJ	ENSUMUG00000037865	miRNA gene	Chr4:41920995-41921119 (-)
LP/J	ENSMUSG00230043074	miRNA gene	Chr4:45252917-45253041 (-)
NOD/ShiLtJ	ENSMUSG00190025797	miRNA gene	Chr4:41554486-41554610 (-)
NZO/HlLtJ	ENSMUSG00225007108	miRNA gene	Chr4:49847259-49847383 (-)
PWK/PhJ	ENSLUMG00010013000	miRNA gene	Chr4:40923601-40923725 (-)
SPRET/EiJ	ENSMSPG00010009531	miRNA gene	Chr4:41847756-41847880 (-)
WSB/EiJ	ENSIUOG00005004826	miRNA gene	Chr4:41313133-41313257 (-)

Homology

• Gene Tree
  Gm56273
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074999 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074999	Ensembl Gene Model | MGI Sequence Detail	125	C57BL/6J
transcript	ENSMUST00020182372	Ensembl | MGI Sequence Detail	125	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56273:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr41536	Chr4:45397646-45397659 (-)	-535 bp