Gm56260 Gene Detail

Summary

• Symbol
  Gm56260
• Name
  predicted gene, 56260

• Feature Type
  miRNA gene
• IDs
  MGI:6848978
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr11:106673997-106674097 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  32 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848978	miRNA gene	Chr11:106673997-106674097 (-)
129S1/SvImJ	ENSMUSG00200033477	miRNA gene	Chr11:103980857-103980957 (-)
A/J	ENSMUSG00195022537	miRNA gene	Chr11:103679888-103679988 (-)
AKR/J	ENSMUSG00220034978	miRNA gene	Chr11:103892924-103893024 (-)
BALB/cJ	ENSMUSG00180019880	miRNA gene	Chr11:104002204-104002304 (-)
C3H/HeJ	ENSMUSG00175014005	miRNA gene	Chr11:103951254-103951354 (-)
C57BL/6NJ	ENSMUSG00215018848	miRNA gene	Chr11:103519717-103519817 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040981	miRNA gene	Chr11:103420747-103420847 (-)
CBA/J	ENSMUSG00210013735	miRNA gene	Chr11:103660604-103660704 (-)
DBA/2J	ENSMUSG00185020827	miRNA gene	Chr11:104001067-104001167 (-)
FVB/NJ	ENSMUSG00205037116	miRNA gene	Chr11:103806554-103806654 (-)
JF1/MsJ	ENSUMUG00000027401	miRNA gene	Chr11:104264738-104264838 (-)
LP/J	ENSMUSG00230035127	miRNA gene	Chr11:105053124-105053224 (-)
NOD/ShiLtJ	ENSMUSG00190024598	miRNA gene	Chr11:103999522-103999622 (-)
NZO/HlLtJ	ENSMUSG00225052606	miRNA gene	Chr11:107088191-107088291 (-)
PWK/PhJ	ENSLUMG00010016348	miRNA gene	Chr11:103793904-103794004 (-)
SPRET/EiJ	ENSMSPG00010037374	miRNA gene	Chr11:104296652-104296752 (-)
WSB/EiJ	ENSIUOG00005018271	miRNA gene	Chr11:103784962-103785062 (-)

Homology

• Gene Tree
  Gm56260
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076984 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076984	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020182653	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56260:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr111405	Chr11:106674775-106674795 (-)	-688 bp
Tssr111404	Chr11:106674169-106674188 (-)	-82 bp